Thermococcus sp. 5-4: CDI07_04270 Help Entry CDI07_04270       CDS       T05088                                  Name (GenBank) RNA-splicing ligase RtcB   KO K14415   tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] Organism thh  Thermococcus sp. 5-4 Brite KEGG Orthology (KO) [BR:thh00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03016 Transfer RNA biogenesis [BR:thh03016]     CDI07_04270 Enzymes [BR:thh01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase      CDI07_04270 Transfer RNA biogenesis [BR:thh03016]  Eukaryotic type   tRNA spricing factors    tRNA splicing ligase complex     CDI07_04270  Prokaryotic type    tRNA splicing ligases     CDI07_04270 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RtcB Motif Other DBs NCBI-ProteinID:  ASA77541 UniProt:  A0A1Z2TM66 LinkDB All DBs Position complement(767498..768937) Genome browser AA seq 479 aa AA seqDB search MVPLKRIDKIRWEIPKYDKRMRVPGRVYADDQLIEKMRGDRTLEQAANVAMLPGIYKYSI VMPDGHQGYGFPIGGVAAFDVKEGVISPGGVGYDINCGVRLIRTNLTEKEVRPKIKELVD TLFRNVPSGLGSKGRVRLHWTQLDDVLADGAKWAVDNGYGWKEDLEHLEEGGRMEGANPG AVSQKAKQRGAPQLGSLGSGNHFLEVQVVDKIFDEKIAKAYGLFEGQVVVMVHTGSRGLG HQVASDYLRIMEKANRKYGVPWPDRELVSVPFQTEEGQRYFSAMKAAANFAWANRQMITH WVRESFEEVFKRKAEDMEMSIVYDVAHNIAKVEEHEVDGRKVKVVVHRKGATRAFPARHP DVPRAYRDVGQPVLIPGSMGTASYVLAGAEGSMRETFGSTCHGAGRLMSRHAATRQYRGD RLRNELLQRGIYVRAASLRVVAEEAPGAYKSVDNVVNVVHQAGIANLVARMRPMGVAKG NT seq 1440 nt NT seq  +upstreamnt  +downstreamnt atggtgccgctgaagaggatagataaaatacgttgggagataccgaagtacgacaagaga atgcgcgttccgggcagagtttacgctgacgaccagctgatagagaagatgaggggagac agaacccttgagcaggccgccaacgttgcgatgctccccggcatctacaagtactccatc gtcatgcccgacggccatcagggctacggcttcccgatcggtggtgttgcggcctttgac gtgaaagagggcgtcataagccccggaggagtgggttacgacatcaactgcggtgtcagg ctcataaggacgaacctcaccgagaaggaagtgagaccgaagataaaggagctcgttgac actctcttcaggaacgtgccctccggactgggaagcaaaggaagggtaaggctccactgg acgcagcttgacgatgtcctcgctgatggtgccaagtgggccgtcgataacggctacggc tggaaggaggatctcgagcatcttgaggagggcggaaggatggagggcgcgaatccagga gcagttagccagaaagcaaagcagaggggagcgccgcagctcggttcccttggctccgga aaccacttccttgaggtccaggtggttgataagatcttcgacgaaaagatagctaaagcg tatggcctctttgaggggcaggtcgttgtcatggttcacaccggaagcaggggtctcggc caccaggtggcgagcgactacctcaggataatggagaaggccaacaggaagtacggtgtg ccctggcctgaccgtgagctcgtcagcgttccattccagacagaggaaggacagaggtac ttcagcgcgatgaaggccgctgcgaatttcgcgtgggccaacaggcagatgataacccac tgggtcagggagtcctttgaagaggtcttcaagaggaaggccgaagacatggaaatgagc atcgtttacgatgtggcgcacaacatagccaaggtcgaggagcacgaggtcgacggaagg aaggtcaaggtcgtggttcacaggaagggagcaacgagagcattccctgccagacacccc gacgtgccgagggcctaccgtgacgttggtcagccggttctgattccaggctcgatggga acggcaagctacgtccttgccggggcagagggttccatgagggagaccttcggttcaacg tgccacggagccggaaggctgatgagcaggcacgccgcaaccaggcagtaccgcggcgac aggctgaggaacgagctccttcagaggggaatctacgtccgcgcggcttcgctgagggtc gttgcagaggaggccccgggggcctacaagagtgtcgacaacgttgtgaacgtcgtccac caggcgggcatagcgaacctcgtggcgagaatgcgcccgatgggagttgccaagggttga

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