Trichechus manatus latirostris (Florida manatee): 101344289
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Entry
101344289 CDS
T05135
Name
(RefSeq) sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
101344289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101344289
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101344289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
ATP-synt_B
IQ
Neur_chan_memb
Zip
Chlamy_scaf
FUT8_N_cat
GPHH
Motif
Other DBs
NCBI-GeneID:
101344289
NCBI-ProteinID:
XP_004375654
UniProt:
A0A2Y9DJB8
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MEQTVLVPPGPDSFTFFTRESLVAIERRIAEEKAKNPKPDKKDDDENGPKPNSDLEAGKN
LPFIYGDIPPGMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKI
AIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCL
EDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHSIERNVTVDY
NGTLVNETVVEFDWKSYIQDSRYHYFLEGFLDALLCGNSSDAGQCPEGYMCVKAGRNPNY
GYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILA
VVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAATASEHSREPSAAGGLS
DSSSETSKLSSKSAKERRNQRKKRKQKEQSGGEEKDEDEFHKSESEDSIRRKGFRFSIEG
NRLTYEKRYSSPHQSLLSIRGSIFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFED
NESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVFPANGKMHSTVDCNGVVSLVGGPSVP
TSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASIL
TNTVEELEESRQKCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVL
NTLFMAMEHYPMTEHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIV
TLSLVELGLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKISSNCELPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM
EVAGQAMCLTVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMH
KGIAYVKRKIYEFIQQSFVRKQKILDEIKPLDDLNNKKERCMSNHTTEIGKDLDYLKDVN
GTTSGIGTGSSVEKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEE
SKEKLNGSSSSSEGSTVDIGAPAEEQPVVEPEETLEPEACFTEGCVQRFKCCQISVEDGR
GKQWWNLRRTCFRIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYNCVNTT
TGEMFDISEVNNHSDCLKLIERNETARWRNVKVNFDNVGFGYLSLLQVATFKGWMDIMYA
AVDSRNVELQPKYEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPGKFDPDATQFMEFEKLSQFAAALDPPLNLPQPNK
LQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDALRIQMEERFMASNPSKVSYQPI
TTTLKRKQEEVSAVIIQRAYRRHLLKRTVKQASFTYNKNKIKGGANLLVKEDMIIDRINE
NSITEKTDLTMSTAACPPSYDRVTKPIIEKHEQEGKDEKAKGK
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccgggacctgacagcttcaccttcttcaccagagaa
tctcttgtggctattgaaagacgcattgcagaagaaaaggctaagaatcccaaaccagac
aagaaagatgatgacgaaaatggtccaaagccaaacagtgacttggaagctggaaaaaac
cttccatttatttatggagacattcctccagggatggtgtcagagcccttggaggacctg
gacccgtactatatcaataaaaaaacttttatagtattgaataaagggaaggccatcttc
cggttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaata
gctattaagattttggtacattcattattcagcatgctaattatgtgcacaattttgacg
aactgcgtgtttatgacaatgagtaatcctcctgactggacaaagaatgtagagtacacc
ttcacaggaatatatacatttgaatcactcataaaaattattgcaaggggcttctgctta
gaagattttactttccttcgggacccatggaactggctcgatttcactgtcattacattt
gcatacgtgacggagtttgtggacctgggcaatgtctcagcgttgagaacattcagagtt
ctccgagcactgaaaacgatttcagtcattccaggcctgaagaccattgtgggggcacta
atccagtcagtgaagaagctctctgatgtcatgatcctgactgtgttctgtctgagtgtg
tttgctctaattgggctgcagctgttcatgggcaacctgaggaataaatgtgtacaatgg
cctcccaccaatgcttccctggaggaacatagtatagagaggaatgtaacagtggattac
aacggcacacttgtaaacgaaactgttgttgagtttgactggaaatcatatattcaagat
tcaagatatcattatttcttggagggttttttagatgcactgctatgtggaaatagctct
gatgcaggccaatgtccagaaggatacatgtgtgtgaaagctggtagaaatcccaattat
ggctacacaagctttgatactttcagttgggcttttttggccctgttccgactgatgact
caagacttctgggaaaatctttaccaactgacattacgtgctgctgggaaaacatacatg
atattttttgtgttggtcattttcttgggctcattctacttaataaatttgattctggct
gtggtcgccatggcctatgaggaacagaatcaggccaccttggaagaggcagagcagaaa
gaggccgaatttcagcagatgcttgagcagcttaaaaagcaacaagaagcagctcagcag
gcagcagctgcaactgcctcggagcattccagagaacccagtgcagcaggcggcctctca
gacagctcatccgaaacctctaagttgagttctaagagtgctaaggaaagaagaaatcag
aggaagaaaagaaaacagaaagagcaatctggtggggaagagaaagatgaggatgaattc
cataaatctgaatctgaagacagcatcaggaggaaagggtttcgcttctccatcgaaggg
aatcgattgacatacgaaaagaggtactcctccccacaccagtctttgttgagcatccgt
ggctctatattttctccaaggcgaaatagtagaacaagccttttcagctttagagggcga
gcaaaagacgtgggatctgagaatgactttgctgatgatgagcacagcacattcgaggat
aatgagagccggagagattccctgtttgtgccgcggcgacatggagagcgacgtaacagt
aacctaagtcagactagtaggtcgtctcggatgctggcggtgtttccagcgaatgggaag
atgcacagcactgtggattgcaatggtgtggtttccttggttggtggaccttcggttcct
acatcgcctgttggacagcttctgccagaggtgataatagataagccagctactgatgac
aatggaacaaccactgaaactgaaatgagaaagagaaggtcaagttctttccatgtgtcc
atggactttctagaagacccttcccaaaggcagagggcaatgagtatagccagcatttta
acaaatacagtagaagaacttgaagaatccaggcagaaatgccctccctgttggtataaa
ttttccaacatattcttaatctgggactgttcgccatattggttaaaagtgaaacatatt
gtcaacctggttgtgatggacccatttgttgacctggccatcaccatctgtattgtctta
aatactcttttcatggccatggaacactatccaatgacggaacatttcaataatgtgctt
acagtaggaaacttggtcttcactggaatctttacagcagaaatgtttctgaaaattatt
gccatggatccttactattatttccaagaaggctggaatatctttgatggtttcattgtg
acgctcagcctggtagaacttggccttgccgatgtggaaggattatcagttctccgttca
ttcagattgcttcgagtattcaaactggcaaaatcttggccaacattaaatatgctaata
aagatcattggcaattcagtgggggctttgggaaatctaaccctggtgttggccattatc
gtcttcatttttgccgtggttggcatgcagctctttggtaagagctacaaagattgtgtc
tgcaagatctccagcaactgtgaactccctcgctggcacatgaatgacttcttccactcc
ttcctgattgtgttccgggtgctgtgtggagagtggatagagaccatgtgggactgtatg
gaggtcgctggccaagccatgtgccttactgtcttcatgatggtcatggtcattggtaac
ctggtggtcctgaacctctttctggccttgcttctgagctcattcagtgcagacaacctt
gctgccactgatgatgataatgaaatgaacaatctccagattgctgtggatagaatgcac
aaagggatagcttatgtgaaaagaaaaatatatgaatttattcaacagtcctttgttagg
aaacaaaagattttagatgagattaaaccacttgatgatctaaacaacaagaaagagagg
tgtatgtccaatcatacaacagaaattgggaaagaccttgactatcttaaagatgtaaat
ggaaccacaagtggcataggaactggcagcagtgttgaaaaatacattatcgatgaaagt
gattacatgtcgttcataaacaatcccagtcttactgtgactgtaccaattgctgttgga
gagtctgactttgaaaatttaaacacggaggacttcagcagtgagtcagatctggaagaa
agcaaagagaaacttaatgggagcagtagctcatcggaaggcagcactgtagacataggt
gcgcctgcagaagaacagcctgtagtggaacctgaagaaaccctggaacctgaagcctgt
ttcactgaaggctgtgtacaaagattcaaatgttgtcaaatcagtgtggaagacggaaga
ggaaaacaatggtggaacctgagaagaacatgtttccgaattgttgaacataattggttt
gagaccttcattgttttcatgattctccttagtagtggtgctctggcattcgaagacata
tatattgatcagcgaaagacaattaagactatgttggaatatgctgataaggttttcact
tacattttcattctggaaatgcttctaaaatgggtagcatatggctatcaaacgtatttc
accaatgcctggtgttggcttgacttcttaattgttgatgtttcattggtcagtttaaca
gcaaatgccttgggctactcagaacttggtgccatcaaatctctcaggacactaagagct
ctgagaccgctaagagccttatcacgatttgaagggatgagggtggttgtgaatgccctt
ttgggagcaattccatccatcatgaatgtgcttctggtttgtcttatattctggctaatt
ttcagcatcatgggcgtaaatttgtttgctggcaaattctacaactgtgttaacaccacc
actggtgaaatgtttgacatctccgaagtgaataatcattctgattgcctaaaactaata
gaaagaaatgagactgcccgatggagaaatgtgaaagtaaactttgataatgtaggattt
gggtatctctctttgcttcaagttgccacatttaagggatggatggatataatgtatgca
gcagttgattccagaaatgtggaactccagcctaagtatgaggaaagtctgtacatgtac
ctttactttgttattttcatcatctttgggtccttcttcactttgaacctgtttattggt
gtcatcatagataatttcaaccagcaaaaaaagaagttcggaggtcaagacatctttatg
acagaagaacagaagaaatactacaacgcaatgaaaaaattgggatcaaaaaagccacaa
aagccgatacctcgaccaggaaaatttgatcccgacgcaacccagttcatggaatttgaa
aaactttctcagtttgcagctgctcttgacccccctctcaacttgccacagccaaacaaa
ctacagctcattgccatggacttacccatggtcagtggcgatcgaatccactgtcttgac
atcttatttgcttttacaaagcgagttctaggggagagtggagagatggatgctctccga
atacagatggaagagcgattcatggcttccaatccttccaaggtctcctatcagccaatt
accactactttaaaacgaaaacaagaggaagtatctgctgttattattcagcgtgcttac
aggcgccaccttttgaagcgaactgtaaaacaagcttcatttacttacaataaaaataaa
atcaaaggtggggctaatcttcttgtaaaagaagacatgataattgacagaataaatgaa
aactctattacagagaaaactgatctgaccatgtccacagctgcttgtccaccctcctat
gaccgggtaacaaagccaatcatagaaaaacacgagcaagaaggcaaagatgaaaaagcc
aaagggaaataa
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integrated database retrieval system
