Theileria orientalis: TOT_040000239
Help
Entry
TOT_040000239 CDS
T03460
Name
(RefSeq) uncharacterized protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tot
Theileria orientalis
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tot03016
]
TOT_040000239
Enzymes [BR:
tot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
TOT_040000239
Transfer RNA biogenesis [BR:
tot03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
TOT_040000239
Prokaryotic type
tRNA splicing ligases
TOT_040000239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
20716324
NCBI-ProteinID:
XP_009692160
UniProt:
J4DQ54
LinkDB
All DBs
Position
4:join(506179..506455,506491..506718,506819..507015,507091..507471,507506..507772)
Genome browser
AA seq
449 aa
AA seq
DB search
MKKTVKYEDQLDYIQKSNEVKNLFVIKKGFVPNMNVEGHLFANENLSKLLFDELRQFTDE
PGSFLPALKQLANVAALPGIVKSSIALPDAHSGYGFSIGNVAAFDMDNCNSVVSPGGVGF
DINCGVRLLRTGLLYKDIEPIKEQLVQKLFDLIPVGVGCQGQIPCDSNDLDDILEYGMDW
SVSSGYSWAEDKEHCEEFGRMVQADPTVVSFRAKKRGLSQIGTLGAGNHYAEVQVVEEIY
DEYSAKVMGIDRIGQVCVMMHTGSRGLGHQVASDALVDMENSLNKSKIKVNDKQLACARI
HSEEGRKYIKAMAAAANYAWVNRSVMTHLARKSFEEVLRESADDLDMHVVYDVSHNIAKI
EDHMIDGKLKRLLLHRKGSTRAFPPYHPLISADFQHIGQPVLVGGTMGTCSYVLTGTQLA
MDLTLGSTCHGSGKSIGSRCAFKITTNGP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacagtcaaatatgaagatcaacttgactatatccaaaagagtaatgaagtt
aagaacctctttgttatcaagaagggctttgtgcctaatatgaacgtggaaggtcaccta
tttgcaaatgaaaatttatcaaagctcctatttgatgaacttaggcagtttacagatgaa
ccggggtcttttcttccagctttaaagcagttagcaaatgttgccgcactgcctggtata
gttaagagcagtatagctcttccagatgcacattctggttacggcttttctatcggaaac
gttgcagcttttgatatggataactgcaattcggtggtatctccagggggagttggcttc
gatattaactgtggagtccggctactgcgaacaggtttactatataaggatattgagcct
ataaaggagcagctggttcaaaaactgtttgatttgatcccagtgggtgttggatgccaa
ggtcaaataccatgtgatagtaacgacttggacgatatactggaatacgggatggactgg
tcagtatcgtccgggtactcgtgggccgaagacaaggagcactgtgaagaattcggcagg
atggttcaggcagatcccacagttgtgtcattcagggctaaaaagagagggctgtcgcaa
ataggaacacttggcgctggaaaccactacgcggaggtccaggtcgtcgaggagatatac
gatgaatacagtgccaaggtcatgggaatcgataggatcggccaagtgtgtgtgatgatg
cacactgggtccagagggctgggccaccaagttgcttcagatgcactggtggatatggag
aacagcctaaacaagtctaagataaaggtaaacgataagcagttggcatgcgcaagaatc
cactccgaggaggggaggaaatacatcaaagcgatggcggcggctgccaactacgcctgg
gtcaacaggagtgtgatgacgcacctggccaggaagtccttcgaggaggtgcttagggaa
tcggccgacgacctggatatgcacgtagtttacgacgtttcgcacaacattgctaagatc
gaggaccacatgatcgacgggaagctgaagaggctcctcctccacaggaaggggtcgacg
agggcctttccgccctaccacccgcttatatcggcggatttccagcacattgggcagccg
gtgctcgttggtggcaccatgggcacctgctcgtacgtgttgacagggactcagctggcc
atggacctaacgctagggtccacctgccacggatcaggtaagtcaatcggtagcagatgt
gcttttaaaattaccactaacggtccatag
DBGET
integrated database retrieval system
