Salipiger profundus: Ga0080559_TMP3008
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Entry
Ga0080559_TMP3008 CDS
T04656
Name
(GenBank) ribulose 1,5-bisphosphate carboxylase small subunit
KO
K01602
ribulose-bisphosphate carboxylase small chain [EC:
4.1.1.39
]
Organism
tpro
Salipiger profundus
Pathway
tpro00630
Glyoxylate and dicarboxylate metabolism
tpro01100
Metabolic pathways
tpro01110
Biosynthesis of secondary metabolites
tpro01120
Microbial metabolism in diverse environments
tpro01200
Carbon metabolism
Module
tpro_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
tpro00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Ga0080559_TMP3008
Enzymes [BR:
tpro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
Ga0080559_TMP3008
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Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
Mononeg_RNA_pol
Motif
Other DBs
NCBI-ProteinID:
APX23804
UniProt:
A0A1U7D6L5
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All DBs
Position
complement(2565136..2565555)
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AA seq
139 aa
AA seq
DB search
MRLRQGQFSFLPDLTDDDIRTQAQYAIDQGWAVSVEYTDDPHPRNSYWEMWGHPMFDNRD
AAAVVFEVNECRKEHGSKYIRVLAFDATAGWESIRMSFIVNRPAEEPGFRVVRQEAEGRS
IRYTIESYAMREPEGARYA
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgagacagggccagttcagctttcttcccgacctcaccgacgacgacatccgc
acccaggcgcaatacgccatcgaccagggctgggcggtgtcggtcgaatacaccgacgat
ccgcacccccggaacagctactgggagatgtggggccacccgatgttcgacaaccgcgac
gccgccgccgtggtcttcgaggtgaacgagtgccgcaaggagcacggctcgaaatacatc
cgggtgcttgccttcgacgccaccgccggatgggaatcgatccgcatgagcttcatcgtc
aaccgccccgccgaggagccgggcttccgcgtggtacggcaggaggccgagggacgctcg
atccgctacaccatcgagagctacgccatgcgcgagccagagggcgcacgctacgcctga
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