| T number | T04656 |
| Org_code | tpro |
| Name | Salipiger profundus JLT2016 (Thiobacimonas profunda JLT2016) |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 1229727 |
| Lineage | Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Salipiger |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_001969385.1 Complete Genome)
BioProject: 175613 |
| Comment | Isolated from deep-sea water of the Southeastern Pacific.
|
| Chromosome | Circular |
| Sequence | GB: CP014796 |
| Length | 4609584 |
| Plasmid | pTPRO1; Circular |
| Sequence | GB: CP014797 |
| Length | 225797 |
| Plasmid | pTPRO2; Circular |
| Sequence | GB: CP014798 |
| Length | 126548 |
| Plasmid | pTPRO3; Circular |
| Sequence | GB: CP014799 |
| Length | 27822 |
| Plasmid | pTPRO4; Circular |
| Sequence | GB: CP014800 |
| Length | 25119 |
| Plasmid | pTPRO5; Circular |
| Sequence | GB: CP014801 |
| Length | 102837 |
| Plasmid | pTPRO6; Circular |
| Sequence | GB: CP014802 |
| Length | 183958 |
| Plasmid | pTPRO7; Circular |
| Sequence | GB: CP014803 |
| Length | 111411 |
| Plasmid | pTPRO8; Circular |
| Sequence | GB: CP014804 |
| Length | 11188 |
| Statistics | Number of nucleotides: 5424264
Number of protein genes: 5205
Number of RNA genes: 64
|
| Created | 2017 |
| Reference | PMID: 27762339 |
| Authors | Tang K, Yang Y, Lin D, Li S, Zhou W, Han Y, Liu K, Jiao N |
| Title | Genomic, physiologic, and proteomic insights into metabolic versatility in Roseobacter clade bacteria isolated from deep-sea water. |
| Journal | Sci Rep 6:35528 (2016)
DOI: 10.1038/srep35528 |
Salipiger profundus