Trachemys scripta elegans (red-eared slider): 117878023
Help
Entry
117878023 CDS
T07347
Name
(RefSeq) uncharacterized protein LOC117878023 isoform X1
KO
K01587
phosphoribosylaminoimidazole carboxylase / phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:
4.1.1.21
6.3.2.6
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00230
Purine metabolism
tst01100
Metabolic pathways
Module
tst_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
117878023
Enzymes [BR:
tst01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.21 phosphoribosylaminoimidazole carboxylase
117878023
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase
117878023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_4
MADF_DNA_bdg
Myb_DNA-bind_3
LAGLIDADG_3
LAGLIDADG_WhiA
Myb_DNA-bind_5
FadA
Motif
Other DBs
NCBI-GeneID:
117878023
NCBI-ProteinID:
XP_034627758
LinkDB
All DBs
Position
5:complement(87237498..87270094)
Genome browser
AA seq
704 aa
AA seq
DB search
MESGAGKHWTEEEVKALLSVWSEKNIRKQLHGTLRNKGIFIYIAKRLQELGVCRDWKQCR
AKYKNLKYEFRTVKYAHNSGDATKTMKFFHDLDAILQYEPVTQLTEDENGRCSATERQLN
ISTTTENTEGEISVALEEDEDVPEDPLLFISHVRPIELGNSYLCLSPTPPDVGNPTSILE
TSKNPPFIPTVANEGGKHWTVNEVRALIHIWSDKNIQQQLEVTVRNKRIFEQVAARLQKF
GIERDWKQCRTKYKNLKHEYKSVKNAQDSGNTSKSMKFFNELDAILGHNTGEQSSKSDNE
EGERPTEWIEAKTEKDSLGIPGDTGEEDSVSNMSEELQVTHIEKVSDTVLPDKFKEDKSV
SNLLEELGATHIKEEEDIGLDEVSATTTSENLAASHVPRGKDETKIPEDKEDFINFTPED
LESTHIKKETIDIDDDSISTTSEDISGPSVVKQITGTDNLIPLDEAQNHFRVITVHDTGA
GKHWSDNEVRALINIWSDEKIQQMLEGATRNKEIFEEIARRLMKFGIDRDWKQCRTKYKN
LKYEYRALQKENDHPGNPRRKMRFYDEVDCIFRRQPLVASSWGCESSNLISESVGDIITN
TGPWGIKRKASDESSPGPLKKSASEKAVVQFQRSLTDRMHTVTEGKKALLERLCKQEETQ
DISRTQLYGDPPAIKQVGLMNFLPNSHAKRKYRQSTDERWKRSI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggagcaggaaagcattggactgaagaggaggttaaagccttgctaagcgtc
tggtcagaaaaaaacataagaaaacaacttcatggaacactaaggaataaaggaatattt
atctacattgctaaaagactacaggagttaggagtttgcagagactggaaacagtgccgt
gcaaagtataaaaatctgaagtatgaattcagaacagttaaatatgcccacaactctgga
gatgccactaaaaccatgaagttttttcatgatctggatgctatactgcaatatgaacca
gtcacacaattaacagaggacgaaaacggcaggtgctctgcaactgagagacagctgaac
ataagcactaccacagagaacactgaaggtgaaatatcagttgcattagaagaggatgag
gatgtcccagaggatccattactttttatttcacatgtcagaccaattgaactaggtaac
tcatacctgtgtctctcccccaccccacctgatgtaggtaacccaacatcaatattagag
acgtccaaaaatccaccttttattccaacggtagcaaacgaaggaggaaaacactggact
gtcaatgaagtcagagctctaatacatatatggtcagacaaaaacatccagcaacaactt
gaagtgacagtgagaaataaaagaatatttgaacaagttgctgctaggcttcaaaaattt
ggaattgaaagggactggaagcagtgcagaacaaagtataaaaacttaaaacatgaatac
aaaagcgtaaaaaatgcccaagactcagggaatacaagtaaaagtatgaaattttttaat
gaactggatgccattctgggacacaacactggagagcaatcaagcaaatcagataatgaa
gaaggtgaaaggcctacagaatggatagaagctaaaacagaaaaagactccttaggaata
cctggagacacaggtgaagaggactctgtcagtaatatgtcagaagagctacaggtcaca
catatagagaaagtttctgacacagtgctccctgacaaattcaaagaagacaagtctgta
agcaatcttttagaagaactaggtgccacacatataaaggaagaggaggatattggttta
gatgaggtttctgcaacgactacttcagagaatctggcagcttcgcatgtaccaagaggg
aaagatgagacaaaaatccctgaagataaagaggacttcattaatttcaccccagaagac
ttggaatctacacatataaagaaagagacaattgacatagacgatgattctataagcact
acttcagaggatatatctggcccatcagtagtgaaacagataactgggacagacaattta
attcctttggatgaagcacagaatcactttagggttattacagttcatgatacaggagca
ggaaaacactggagtgataatgaagtcagagctctgataaatatatggtcagatgagaag
atacaacaaatgcttgaaggagcaacaagaaataaagaaatctttgaggagattgccaga
agattaatgaaatttggcatagacagagactggaagcagtgtcgcacaaagtacaagaac
ttaaaatatgaataccgcgcactgcaaaaagaaaatgatcatcctggcaatcccagacga
aagatgaggttttacgatgaagttgattgcatcttcagaagacaacctctagttgcatct
agctggggatgtgaaagttctaatctcatatcagagtcagtgggagacattatcacaaac
acaggaccttggggtatcaagagaaaagcatctgatgaatcatcacctgggccgcttaag
aagagtgcttctgagaaagctgtagtacagtttcaaagaagtttaacagacagaatgcat
acagtaacagaaggcaaaaaagcacttttagaaaggctttgtaaacaggaggaaacacaa
gacatcagcagaacacagctgtatggtgatcctccagctataaaacaggttggtttaatg
aactttctaccaaactcgcatgcaaaaagaaaatacagacaatccacagatgagagatgg
aagagatctatttga
DBGET
integrated database retrieval system
