Trachemys scripta elegans (red-eared slider): 117886379
Help
Entry
117886379 CDS
T07347
Symbol
GALNS
Name
(RefSeq) N-acetylgalactosamine-6-sulfatase
KO
K01132
N-acetylgalactosamine-6-sulfatase [EC:
3.1.6.4
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00531
Glycosaminoglycan degradation
tst01100
Metabolic pathways
tst04142
Lysosome
Module
tst_M00077
Chondroitin sulfate degradation
tst_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117886379 (GALNS)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117886379 (GALNS)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.6 Sulfuric-ester hydrolases
3.1.6.4 N-acetylgalactosamine-6-sulfatase
117886379 (GALNS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfatase
Sulfatase_C
Phosphodiest
SGSH_C
DUF229
Motif
Other DBs
NCBI-GeneID:
117886379
NCBI-ProteinID:
XP_034643992
LinkDB
All DBs
Position
13:5459459..5517697
Genome browser
AA seq
518 aa
AA seq
DB search
MERRLLLSLCLCWALSAGGAERSGPPNLLILLMDDMGWGDLGVFGEPSKETPNLDQMASE
GMLFPNFYTANPLCSPSRAALLTGRLPIRNGFYTTNAHARNAYTPQEIVGGIPGSELLLP
ELLKKAGYVSKIIGKWHLGHRPQFHPLKHGFDEWFGSPNCHFGPYDNKATPNIPVYRDRE
MIGRYYEDFKIDLKTGEANLTQIYLQEALDFISRQQASHQPFFLYWAIDATHAPVYASKH
FLGTSQRGLYGDAVREIDDSIGKILKSLQNLGISENTFVFFTSDNGAALISAPKQGGSNG
RFLCGKQTTFEGGMREPAIAWWPGQIPAGHVSHQLGNVMDLFTTSLSLAGLQPPSDRQID
GIDLSPVILQGKLIDRPIFYYRGNEMMAVRLGLYKAHYWTWINSWEQFSQGIDFCPGQNI
SGVTTHTQEEHTKLPLLFHLGRDPGEKYPIRFSSSEYQEVMEQISPKVQLHKETMVPGEP
QLNVCDKAVMNWAPPGCEKLGKCLEPPKSNPKKCFWPH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcgcctgctgctgtccctgtgcctgtgctgggccctgagcgcggggggcgcc
gagcgcagcgggccccccaacctcctcatcctgctcatggacgatatgggttggggtgat
ttgggagtgtttggagagccctctaaagaaacccctaacttggaccagatggcttcagaa
gggatgctcttcccaaatttctacactgctaaccctctgtgctcaccatcacgagcagcg
ctgttgacgggacgtcttcccatcaggaatgggttctacaccacgaatgcccatgccaga
aatgcctatacaccacaggaaatagtagggggaatcccaggttctgagctgctgcttcca
gaattgctgaagaaggcaggatatgtcagtaagatcattggcaaatggcatctgggtcac
agaccccaattccaccccttgaagcatggatttgatgaatggtttggatcccctaattgc
cattttggaccttacgataacaaagccaccccaaacatccctgtttatagggacagggaa
atgattggcagatattatgaagatttcaaaattgatctgaagacaggggaagcaaactta
actcagatctacttacaggaagctctcgactttattagcaggcagcaagccagtcatcag
ccattctttctctattgggctattgatgctactcatgctcctgtttatgcctccaaacat
ttcttgggcactagccagagagggttgtatggtgacgcagtgcgagaaattgatgacagc
attgggaaaatcctaaaatcccttcaaaacctgggcatcagtgagaacacgtttgtgttt
ttcacatctgataatggagctgctcttatttcagcacctaaacaaggaggtagcaatggt
cgctttctgtgtggtaaacaaaccacttttgaaggtgggatgagggagccagctattgct
tggtggccaggccagatacctgcaggacacgtgagtcatcagctgggtaatgtgatggat
ctcttcaccaccagcctctccctagcgggattgcagcctcccagtgacagacagattgac
ggtattgacctttctcctgttatcctgcagggcaagctaattgacaggccgatattctat
taccgtggcaacgagatgatggcagtaagacttgggctttacaaggctcactactggacc
tggatcaactcctgggagcagttcagtcagggtattgatttctgtcctgggcagaacatt
tctggagtaaccacccatactcaggaggaacacaccaaactgcctctgctcttccacttg
ggaagggatcctggggaaaagtatccgataaggttttccagctctgagtaccaggaagtt
atggaacaaatatcccccaaagtccagctgcacaaggagaccatggtgccaggggagcca
cagttaaacgtctgtgacaaggccgtcatgaattgggctcctccaggctgtgagaagcta
ggaaagtgtttggaacctcccaagtccaatccaaagaaatgcttttggccgcactaa
DBGET
integrated database retrieval system
