Tachysurus vachellii: 132842940
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Entry
132842940 CDS
T09596
Symbol
rab5aa
Name
(RefSeq) RAB5A, member RAS oncogene family, a
KO
K07887
Ras-related protein Rab-5A
Organism
tvc
Tachysurus vachellii
Pathway
tvc04137
Mitophagy - animal
tvc04144
Endocytosis
tvc04145
Phagosome
tvc04148
Efferocytosis
tvc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
132842940 (rab5aa)
04145 Phagosome
132842940 (rab5aa)
04137 Mitophagy - animal
132842940 (rab5aa)
04148 Efferocytosis
132842940 (rab5aa)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132842940 (rab5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132842940 (rab5aa)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvc04147
]
132842940 (rab5aa)
04031 GTP-binding proteins [BR:
tvc04031
]
132842940 (rab5aa)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
132842940 (rab5aa)
Endosome - Lysosome transport
132842940 (rab5aa)
Exosome [BR:
tvc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132842940 (rab5aa)
Exosomal proteins of other body fluids (saliva and urine)
132842940 (rab5aa)
Exosomal proteins of colorectal cancer cells
132842940 (rab5aa)
Exosomal proteins of bladder cancer cells
132842940 (rab5aa)
GTP-binding proteins [BR:
tvc04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
132842940 (rab5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
MMR_HSR1
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
132842940
NCBI-ProteinID:
XP_060721925
LinkDB
All DBs
Position
3:15195415..15202205
Genome browser
AA seq
214 aa
AA seq
DB search
MANRGAVTRPSGSNAANKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QMVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALSGNKADLANKRAVDIQEAQSYADDNNLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPQAAGAGSGGNQPVILTDLAPPSRVHCC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcggggagcggtgactcggcccagcgggtccaacgcggccaataagatctgc
cagttcaaactggtgctgctgggagagtctgcagtgggcaaatcaagtctcgtgctgcgt
tttgttaagggccagttccatgagtttcaggagagtacaataggagcggccttcctgaca
caaatggtgtgcctggatgacacaacagtgaagtttgagatttgggacacagccgggcag
gagcgctaccacagccttgcccccatgtactacagaggagctcaggctgctattgtggtc
tacgacatcaccaatgaagagtcatttgcgagagcaaagaactgggtgaaggagctccag
agacaggccagtccaaacatcgtcatcgctctgtctggaaataaggctgaccttgccaat
aagagagcagtagacatccaggaagcccagtcttacgcagatgacaacaatttgcttttc
atggagacgtcggccaagacctccatgaacgtgaacgagattttcatggctatcgctaaa
agattgccgaagagtgagccacaggccgctggagctggcagcgggggcaatcagcctgtg
atactcaccgacctggcaccaccctccagagtgcactgctgctaa
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