Volvox carteri f. nagariensis: VOLCADRAFT_60125
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Entry
VOLCADRAFT_60125 CDS
T01330
Name
(RefSeq) hypothetical protein
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
vcn
Volvox carteri f. nagariensis
Pathway
vcn00600
Sphingolipid metabolism
vcn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcn00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
VOLCADRAFT_60125
Enzymes [BR:
vcn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
VOLCADRAFT_60125
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Cys_Met_Meta_PP
BDM
Motif
Other DBs
NCBI-GeneID:
9619349
NCBI-ProteinID:
XP_002950142
JGI:
60125
UniProt:
D8TUE6
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
SGAVYMPAEGEHRTLLDDAYRLFSLANPLHADAFPSVRQMEAEVVAITADLLGGGPNGSN
PKVCGAMTSGGTESILSAVKASRDYMAEQKGIRDPEMIIGVSAHAAYWKAAEYFKIKLHV
VPVRHDFRLSAATVRRYMNRNTAILVASAPGFPHGLVDDVKGIAKLAARAGICCHVDACL
GGYCLPFVRRLGGRVPPFDFSVPGVTSMSVDTHKFGQAHKGTSVVLYCSPELRAHQYTRI
TDWTGGLYISPGLAGSRPGALIATAWASLVHLGEEGLMEATRRIMAARDTLIAGIGSQVP
QLEVIGEPEMGVVAFRSRVINIYVLNDWLAARGWHLNALQAPPALHFCFTAMNAAAAPAL
VSALKQGVNEQLANPRAAADAARHGSAPLYGMANVTPDRGMVADFLVAYQDVMLMP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
agcggagccgtgtacatgccggcagaaggcgagcaccgcaccctgttggatgacgcttac
aggttgttcagtctcgccaaccctctgcacgccgacgcctttccaagcgtccgccaaatg
gaagctgaggtggtggcaatcacggccgacctgttggggggcgggccgaacggatctaac
cccaaggtgtgcggcgccatgacctctggcggcacggagagcattctatccgccgtgaag
gccagccgggattacatggcggagcagaaggggatcagggatccagaaatgatcattggc
gtttcggcacatgcagcgtactggaaggccgcagagtacttcaaaatcaagctgcacgtg
gtgccggtgcgccatgactttcgcctttccgctgccaccgtccgccgctacatgaaccgc
aacactgccatcctagtggcctccgcgccgggctttccacatggcctggtggacgatgtt
aaggggattgccaagctcgccgcgcgtgcgggcatctgctgccatgtggacgcttgcctg
ggcggctactgcttgcccttcgtccgacgtctgggaggccgagtgcctccatttgacttc
agtgtgccgggcgtaacctccatgtcggtggacacacacaaatttgggcaggcacacaag
ggcaccagcgtcgtgctctactgcagccccgagctgcgtgcgcaccagtacacacgcatt
accgactggaccggcggcctatacatctccccaggcctggccggcagccgcccaggtgcg
ctcatcgccaccgcttgggcatcgctggtgcacctgggcgaagagggccttatggaggcc
acccgccgcatcatggctgcacgcgatactctcattgccggcatcggctcgcaagttccc
cagctggaagtcattggtgagccggagatgggtgtagtggcgttccgcagtcgcgtcatc
aatatttacgtgctgaacgattggctggcagcacgcggctggcacctaaatgcgctacag
gcgccgccggcgctgcatttctgcttcacggccatgaacgctgcggcggcgccagcgctg
gtgtcggcgctgaagcagggcgtgaacgagcagctagcgaatccgcgggctgcagcggac
gcagcacggcacgggtcggcacctttgtacggcatggcgaacgtgacgccggatcgagga
atggtggcggatttcttggtggcttaccaggacgtcatgctgatgccgtga
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