Vibrio parahaemolyticus BB22OP: VPBB_1489
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Entry
VPBB_1489 CDS
T02409
Name
(GenBank) LSU m5C1962 methyltransferase RlmI
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
vpb
Vibrio parahaemolyticus BB22OP
Brite
KEGG Orthology (KO) [BR:
vpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpb03009
]
VPBB_1489
Enzymes [BR:
vpb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
VPBB_1489
Ribosome biogenesis [BR:
vpb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VPBB_1489
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
TRM
PrmA
Methyltransf_15
PUA
Methyltransf_11
Methyltransf_25
Methyltransf_10
Motif
Other DBs
NCBI-ProteinID:
AGB09969
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All DBs
Position
1:1675907..1677100
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AA seq
397 aa
AA seq
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MTAAIYLVKGREKSVKRKHPWIFSRGIGKVEGEPALGETVDVFTHDGKWLAKAAYSPESQ
IRARIWSFEKEEINKAFFVKRFQNAQLLREDVIERDGLTGYRLIAAESDGLPGVTIDRYQ
NFFVCQLLSAGAEYNKQAIVDALVECFPDCNIYERSDVAVRKKEGLKETTGVLHGEVPPK
SVVIEENGVKISVDIVGGHKTGFYLDQRDSRQQAMKYVKDKEVLNCFSYTGGFGLYALKG
GAKRVINADVSQPALDTAKYNAELNEFDISKKRAVFLNADVFKLLREYRDQGTQFDVVIM
DPPKFAESKAQLNGACRGYKDINMLAMQILKPGGTLLTYSCSGLMDQVLFQKIIADAAVD
ANRQVKFVERFEQAADHPTDTAYPEGFYLKGFACKVL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgctatctatttggttaaaggtcgtgagaaatcggttaagcgcaagcaccct
tggatcttctctcgaggcatcggtaaagttgagggcgaacccgctcttggcgaaacagtt
gatgtgttcactcacgacggtaaatggctagcaaaagcggcatattctccagagtctcaa
atccgcgctcgtatttggagttttgaaaaagaagaaatcaacaaagcgtttttcgtgaag
cgttttcaaaatgctcaacttcttcgtgaagacgtgattgaacgtgatggtttaacaggt
taccgactcatcgccgctgaatctgacggcttgccgggcgtgacgattgaccgctaccaa
aacttcttcgtatgtcaattgctcagcgcaggcgcagaatacaacaagcaagcgattgta
gatgcattggttgaatgcttccctgattgcaatatctacgaacgttctgacgtagcagta
cgtaagaaagaaggtttgaaagagaccactggcgtattgcacggtgaagtgcctccaaaa
tctgtcgtcatcgaagaaaacggcgtaaaaatcagtgtcgacattgtagggggacataaa
acgggcttctacctagaccagcgcgacagtcgtcaacaagcaatgaagtacgttaaagat
aaagaagtactgaactgcttctcttacacgggtggctttggtctttacgcactgaaaggc
ggcgcaaaacgcgtaattaatgcggatgtatctcagccagcattggacacagcaaaatac
aatgcagagctgaacgagtttgatatctcgaaaaagcgtgctgttttcttaaacgcagat
gtatttaaactgcttcgtgaataccgtgaccaaggtactcagtttgatgtggttatcatg
gatccacctaagtttgcagaaagcaaagcgcaactaaatggcgcatgtcgtggttataaa
gacatcaatatgttggcgatgcaaattctaaaacctggtggcacgctactgacctactct
tgctctggcttaatggaccaagttttattccaaaaaatcattgctgacgcagcggtagac
gcaaaccgccaagtgaaatttgttgagcgctttgaacaagccgcagaccacccaaccgat
acggcatacccagaaggtttctacctaaaaggctttgcttgtaaagtgctttaa
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