Variovorax paradoxus B4: VAPA_2c03780
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Entry
VAPA_2c03780 CDS
T02835
Name
(GenBank) sphingosine-1-phosphate lyase-like protein
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
vpd
Variovorax paradoxus B4
Pathway
vpd00600
Sphingolipid metabolism
vpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpd00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
VAPA_2c03780
Enzymes [BR:
vpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
VAPA_2c03780
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AGU52938
UniProt:
T1XK30
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All DBs
Position
2:379130..380371
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AA seq
413 aa
AA seq
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MTTRLPAHGIAWEELQRQLKDASSNDVDWRGGRVPMFVHYAGEDVLEVAKQAYLMYFSEN
GLGPRAFGSLAKFEAEVVAMGLGLLHGGPEACGAMTTGGTESIFLAVKCARDRALARHPG
MGKPRIVMPQSAHPAFDKAAYFLGLEPMRTPLGEDFCADVAAMRAALTADTAMLVGSAPA
FPHGVVDAIPEIAELAREHDIWMHVDGCVGGYFAPFARELGADIPDFDFAVEGVTSISAD
LHKYGYTAKGASTLFFADPASFALMGYHFDNWPRGQYFTHTLVGTRAGGAIAAAWAVMNY
LGKDGYLRVTERVMATRRAMQQRLDALGLPTLGRPELCIFAFGSPLRDMAAIGKGMTARG
WTVGYVNDPPGIHHMLNLTHEPVVGQYLSDMAAVLKEPQTHARAGSGKVDARY
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacgactccccgcccacggcattgcctgggaagagctgcagcgccagctgaaa
gacgccagcagcaacgacgtggactggcgcggcggccgcgtgccgatgttcgtccactat
gccggcgaagatgtgctcgaggtggccaagcaggcctacctgatgtacttctcggagaac
ggcctggggccacgcgccttcggcagccttgccaagttcgaggcggaggtcgtggccatg
gggctaggccttctgcatggcgggccggaagcctgcggcgcgatgacgacgggcggaacc
gagagcatcttccttgccgtcaagtgcgcccgggaccgcgcgctggcgcgccatcccggc
atgggcaagccgcgcatcgtgatgccgcagagtgcgcatccagccttcgacaaggcggcg
tacttcctggggctggagccgatgcgcacgccgctgggcgaggacttttgcgccgacgtg
gccgcgatgcgcgcggccctgacggccgacaccgccatgctcgtcgggtcggcgccggcg
tttccgcatggcgtggtcgatgcgattcccgagatcgccgaactggcgcgcgagcacgac
atctggatgcacgtcgatggctgcgtcggtggctacttcgcgccgttcgcgcgcgagctg
ggcgccgacattcccgacttcgatttcgcggtcgagggcgtgacctcgatttcggcagac
ctgcacaagtacggctacacggccaagggcgcgtcgacgctgttctttgccgatcccgcg
tcgttcgcgctcatgggctaccacttcgacaactggccgcgcggccagtacttcacgcac
acgctcgtcggcacgcgtgccggtggcgccatcgccgccgcatgggccgtcatgaactac
ctgggcaaggacggctacctgcgtgtgaccgaacgcgtgatggcgacgcggcgtgccatg
cagcagagactggacgcgcttggcttgccgacgctggggcgcccggaactgtgcatcttc
gccttcggttcaccgctgcgcgacatggcggccatcggcaagggaatgaccgctcgcggc
tggaccgtgggctacgtgaacgacccgccgggcattcaccacatgctgaacctcacgcac
gagccggtggtagggcagtacctgagcgacatggccgcggtgctcaaggagccgcagacg
catgcaagggctgggtcgggcaaggtggacgcgcggtactag
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