Xenorhabdus bovienii SS-2004: XBJ1_3688
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Entry
XBJ1_3688 CDS
T01186
Symbol
nudH
Name
(GenBank) nucleotide hydrolase, acts on adenosine(5')-pentaphospho-(5')-adenosine (Nudix family)
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
xbo
Xenorhabdus bovienii SS-2004
Pathway
xbo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XBJ1_3688 (nudH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbo03019
]
XBJ1_3688 (nudH)
Messenger RNA biogenesis [BR:
xbo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XBJ1_3688 (nudH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
CBJ82806
UniProt:
D3V577
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All DBs
Position
3585736..3586266
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESPEQAMYRELFEEVGL
NRKDVRVLTSTRSWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLLCNEADINVQRSNAPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFSSIVMPVQESAPQLHSPYLHRRRRS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgatgatggctaccgcccgaatgtaggaatcgtaatttgtaatcgccaaggg
caggtcctttgggctcgccgttatgggcagcattcctggcagtttcctcaggggggtatc
aatccaggggaatcaccagaacaagcgatgtatcgcgagttgttcgaagaagttggttta
aatcgcaaagatgtacgggttctcacatctacccgtagctggctgcgttacaaattaccc
aagcgtttggtgcgttgggatacaaagcccgtttgtattgggcagaagcagcgttggttt
ttattacagttgctttgtaatgaagccgatattaatgtgcagcgcagcaacgcacccgag
tttgatggttggcgttgggtcagttattggtatcctgtcaggcaggtggtttcttttaaa
cgggatgtttatcgccgcgtaatgaaagaattctcttctattgtgatgccagtgcaggaa
tccgctccacagctacattcaccttatttacatcgtcgcagaagaagttag
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