Xenorhabdus budapestensis: HGO23_16920
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Entry
HGO23_16920 CDS
T07176
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
xbu
Xenorhabdus budapestensis
Pathway
xbu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xbu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HGO23_16920 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xbu03019
]
HGO23_16920 (rppH)
Messenger RNA biogenesis [BR:
xbu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HGO23_16920 (rppH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QTL39461
LinkDB
All DBs
Position
complement(3842753..3843283)
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESPEQAMYRELFEEVGL
NRKDVRVLASTRSWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLLCNETDINVQRSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFSSIVMPTQESTSQSYSTYIYRRRRS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgtaggaattgtaatttgtaatcgtcaaggg
caggttctctgggcccgccgttatgggcagcattcctggcagtttcctcaagggggcatc
aatccgggggaatcaccagaacaagcgatgtatcgtgagttgttcgaagaagttggttta
aatcgcaaagacgtacgggttctcgcctccacccgtagctggttgcgttacaaattaccc
aagcgtttggtgcgttgggatacaaagcccgtttgtatcgggcaaaagcaacgctggttt
ttattgcagttgctttgtaatgaaacagatattaatgttcagcgcagtagtacaccagag
tttgatggatggcgttgggtgagttattggtatcctgtcaggcaagttgtttcgtttaaa
cgagatgtataccgccgtgtgatgaaagaattttcttctattgtgatgccaacgcaggaa
tctacttcacaatcctattcaacctatatatatcgtcgtagaagaagttag
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