Xenorhabdus griffiniae: QL128_18700
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Entry
QL128_18700 CDS
T09400
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
xgr
Xenorhabdus griffiniae
Pathway
xgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QL128_18700 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xgr03019
]
QL128_18700 (rppH)
Messenger RNA biogenesis [BR:
xgr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QL128_18700 (rppH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
WMV72108
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All DBs
Position
4096167..4096697
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESPEQAMYRELFEEVGL
SRKDVRVLASTRSWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLLCNEADINVQRSKTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFSSIVMSTQEPASLFHSPYLHRRRKS
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgtaggaattgtaatttgtaatcgccaaggg
caggttctgtgggcccgccgttatgggcagcattcctggcagtttcctcaagggggtatc
aatccaggggaatcaccagagcaagcgatgtatcgcgagttgttcgaagaagttggttta
agtcgcaaagatgtacgggttcttgcttcaacccggagttggttgcgttacaaattaccc
aagcgtttggtgcgttgggatacaaagcctgtttgtattgggcaaaagcaacgttggttt
ttattgcagttattgtgtaatgaagcggatattaatgtgcagcgcagtaagactccagag
tttgatggttggcgttgggtgagttattggtatcctgtccggcaggttgtttcttttaaa
cgagatgtctatcgacgcgtgatgaaagaattctcttctattgtaatgtcaacgcaggag
ccagcttcattattccattcaccttatttacatcgtcgtagaaaaagttag
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