Xiphophorus hellerii (green swordtail): 116713366
Help
Entry
116713366 CDS
T07363
Symbol
sgpl1
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
xhe
Xiphophorus hellerii (green swordtail)
Pathway
xhe00600
Sphingolipid metabolism
xhe01100
Metabolic pathways
Module
xhe_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116713366 (sgpl1)
Enzymes [BR:
xhe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
116713366 (sgpl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
BLH_phosphatase
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
116713366
NCBI-ProteinID:
XP_032409400
LinkDB
All DBs
Position
22:3837115..3853150
Genome browser
AA seq
565 aa
AA seq
DB search
MDYWSALEVYKEMLLLYLEEGRRQINSRCSHREPWQIIGASVLTTLAVLWLKGFLFQRES
LTSRIKKQVFRLVRKIPFVGDNIQKQLNKALDDMSHSLCTLKEGMSYTQQLPTKGLTQSQ
VMEKIKEYQTLNDVQWDKGCVSGAVYWGDETLTKLLVKVYGDFAWSNPLHPDIFPGVRKM
EAEVVRMSCSLFNGGPNSCGTVTSGGTESILMACKAYRDLAYERGVTFPEILAPVSVHAA
FDKAAHYFGMKLVHIPLDQKTMKVDVKAMRRAISKNTAMLVCSAPQFPHGILDPVEEVAK
LAVRYDVPLHVDACLGGFLIVFMEKAGYSLAPFDFRVKGVTSISADTHKYGYAPKGSSVI
LYSDKKYRQYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMYMGESGYVDATKKII
GTARKIRNEMRKIKGVFVFGNPEVSVVAIGSEDFDIFRLSNALTSKGWNLNTLQFPSSIH
LCCTVLHTQPGVADRFIQEVKEEVAIIMKNPREKTTGMGAIYGMAQSIPDRSLVTEISRG
FLDCLYSTEVSKSNISHMNGNGKAH
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggattactggagtgccttggaggtgtataaggagatgctgctgctgtacctggaggaa
ggccggcggcagatcaactcccgctgttcccaccgggagccgtggcaaatcatcggagca
tctgtcctcaccacgctggcagttctctggctcaagggattcctcttccagcgagaaagt
ctcacttccagaatcaagaagcaagtctttcgactcgtcagaaaaataccgtttgttggt
gacaatattcagaagcagctgaacaaggctctggacgacatgtcccacagtctgtgtacg
ctgaaggaggggatgagctacactcagcagctgcccactaaagggctaactcagagccaa
gtcatggaaaaaatcaaagagtatcaaacgctgaatgacgtacagtgggacaaagggtgt
gtttccggtgccgtgtactggggggatgaaacgctgaccaaactcctggtgaaggtttat
ggagattttgcgtggagcaaccctctccacccggacatctttcctggcgtcaggaagatg
gaagctgaggttgtccgaatgtcctgctccctgttcaacggcggacccaactcctgcgga
actgtcacttctggaggaacggagagcatcctgatggcctgcaaagcgtacagagacttg
gcttatgagcggggtgtgacgttccctgaaattctagctccagtgagcgtccacgcagcg
ttcgacaaagcagcacattactttgggatgaaactcgtccacattcctctcgaccagaag
accatgaaggtcgacgttaaggcgatgaggagagccatcagcaaaaacacagccatgctt
gtctgctcggcgccccagttcccccatggcatcctggatccggttgaagaagtagccaag
ctggcggtgcgctacgacgtcccgctgcatgtggatgcctgtttgggcgggtttctcatt
gttttcatggaaaaagctggttactcactcgccccgtttgacttcagagtgaagggagtt
accagcatctctgcagacacccacaagtacggctacgcgcccaaaggctcctctgtgatc
ctctacagcgataaaaagtaccgtcagtaccagtacttcgtggctccagactggcagggg
ggaatctacgcctcgccgtcggtggcgggctccaggcccggaggaatcatcgccgcctgc
tgggccaccatgatgtacatgggagagagcggctacgtggacgccaccaagaagatcatc
ggcacggcgcgcaagatcagaaacgagatgagaaaaataaagggagtgtttgtgttcggg
aacccggaggtgtccgtggtggccatcggctccgaggacttcgacatcttccgcctttcg
aacgcgttgacgtcgaagggctggaacctgaacacgctgcagtttccgtccagcatccac
ctctgctgcacggtgctgcacacccagcctggcgtcgctgatcggttcattcaggaagtt
aaagaggaggtcgccatcatcatgaagaaccccagagagaaaaccacaggaatgggggcg
atctacggcatggcccagtccatcccggaccggtccctggtgacggagatctccagaggg
ttcctggactgtctctacagcaccgaggtatcaaaatccaacatcagccacatgaacggc
aacggcaaagcccactaa
DBGET
integrated database retrieval system
