Xenorhabdus nematophila ATCC 19061: XNC1_4052
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Entry
XNC1_4052 CDS
T01274
Symbol
nudH
Name
(GenBank) nucleotide hydrolase, acts on adenosine(5')-pentaphospho-(5')-adenosine (Nudix family)
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
xne
Xenorhabdus nematophila ATCC 19061
Pathway
xne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XNC1_4052 (nudH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xne03019
]
XNC1_4052 (nudH)
Messenger RNA biogenesis [BR:
xne03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
XNC1_4052 (nudH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
CBJ92077
UniProt:
D3VCP2
LinkDB
All DBs
Position
complement(3920881..3921411)
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AA seq
176 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGESPEQAMYRELFEEVGL
NRKDVRVLASTRSWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLLCNEADINVQRSNTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFSSIVMPIQEPASQFHSPYFYRRRRN
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
gtgattgatgatgatggctaccgcccgaatgtaggaattgtaatttgtaatcgtcaggga
caggttctgtgggcccgccgttatgggcagcattcctggcagtttccccaggggggtatt
aatccgggggaatcaccggaacaagcgatgtatcgcgagttgtttgaagaagttggttta
aatcgcaaagatgttcgggttctcgcttcgacccggagctggttgcgttacaaattaccc
aagcgtttggtgcgttgggatacaaagcctgtttgtattgggcaaaagcaacgttggttt
ttattgcagttgttgtgtaatgaagctgatattaatgtgcagcgcagtaatacgccggag
tttgatggctggcgttgggtcagttattggtatcctgttcggcaagtggtttcttttaaa
cgggatgtgtatcgccgcgtgatgaaagaattttcttccattgtgatgccaattcaggaa
cctgcttcacagtttcattcgccatatttttatcgccgcagaagaaattag
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