Xenopus tropicalis (tropical clawed frog): 100144923
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Entry
100144923 CDS
T01011
Symbol
lcmt2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
100144923 (lcmt2)
Enzymes [BR:
xtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
100144923 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
100144923 (lcmt2)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
100144923 (lcmt2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Motif
Other DBs
NCBI-GeneID:
100144923
NCBI-ProteinID:
NP_001119971
Xenbase:
XB-GENE-5944136
UniProt:
B0BLW5
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Position
3:complement(153788301..153808102)
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AA seq
289 aa
AA seq
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MAMGYKLLGVDLTEVSSLDAALNLAGLSWDCPTLVLGEVALCYMDPARSTALIGWAAERF
RDSRFVLYEQSCPSDPFGRVMTSHFASLNSPLLSLSEFPHIQDQEQRFLHKGWKTCRALD
MNEFCASCVPLPEVQRIHNLEPFDEFEELHLKCSHYFILVASQGFLAEHPCLCPVPERCT
EFEMGPRPVPSGSLAAVPFPVPVTGLRRFGHRSCHMASHGVVTTGGFGEKDGRHQRWAAT
AFSYPSLRRKGHFGSRWTFFSNSSCRGGINLGTCRRGLHSESDADEFTA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgggatacaaactgctcggagtggatctgactgaagtttccagtcttgatgct
gctctgaacttagctggcctctcgtgggactgcccaacattggttctgggagaagtggcg
ctgtgttatatggacccggcacgatccacagcgctgattggctgggcggcagaacgtttc
agagattcgcgttttgtcctgtatgagcagagctgccccagtgacccctttgggcgtgtg
atgaccagccattttgcttctctgaattccccattgctgtcgctcagtgagttccctcac
atacaggaccaggagcagaggtttcttcacaagggctggaagacgtgccgagccctcgat
atgaatgagttctgtgcttcctgtgtccctttgccggaggtgcagcggattcacaacttg
gagccttttgatgaatttgaggagctgcacttgaaatgttcccattattttatccttgtc
gcttcacaaggtttcctggcagaacatccatgtttgtgtcctgttcctgagagatgcaca
gagtttgaaatgggccctaggccagtccctagcgggtccctagcagccgttcccttcccc
gtgccagtcactggtctgcgccgctttggccaccgatcctgtcacatggcatctcatggc
gtcgtaacaaccggcggctttggggagaaggacggccggcaccaaagatgggcggctact
gcattctcttacccctctctcagaaggaaggggcattttggctctcggtggacgtttttc
tccaactcgtcctgccgagggggcattaatcttggaacatgtcgccgggggctgcacagt
gaaagtgacgcagatgaatttacagcctga
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