Yersinia enterocolitica WA: CH47_1039
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Entry
CH47_1039 CDS
T03643
Symbol
rlmI
Name
(GenBank) ribosomal RNA large subunit methyltransferase I
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yew03009
]
CH47_1039 (rlmI)
Enzymes [BR:
yew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
CH47_1039 (rlmI)
Ribosome biogenesis [BR:
yew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH47_1039 (rlmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
Met_10
Methyltransf_15
Methyltransf_25
Methyltr_RsmB-F
PrmA
TRM
PUA
Methyltransf_11
UPF0020
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AJI82791
UniProt:
A0A485DIJ9
LinkDB
All DBs
Position
complement(1112603..1113787)
Genome browser
AA seq
394 aa
AA seq
DB search
MRLFLARGREKSLLRRHPWIFSGAVQRLEGNASAGETIDILDSQGKWLARAAYSPESQIV
ARVWTFQQDEVIDSEFFVRRLQQAQSWRDWLAQRDGLNGYRLIAGESDGLPGITIDRFQN
FLVLQLLSAGAEHQRAALVSALQQCYPECSIYDRSDVSVRKKEGLELTQGTVWGEMPPAL
LPITEHGMKLLVDIQHGHKTGFYLDQRDSRLAARNYADGRRVLNCFSYTGAFAVAALMGN
CQQVISVDTSQSVLDIAKQNVELNQLDLSKAEFIRDDVFQLLRNYRAQGEKFDMIIMDPP
KFVENKSQLASACRGYKDINMLAIQLLRPGGILLSFSCSGLMPTDLFQKILADAALDAGH
DIQFIEQFRQAADHPVIATYPEGLYLKGFACRIM
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctatttcttgctagaggacgtgaaaaatccttacttcgtcgccatccgtggatt
ttctctggggcagtgcaacgccttgaaggcaatgcaagcgcgggtgaaaccatcgatatt
cttgatagccagggaaaatggctggctcgtgcggcctactcacctgagtcacaaattgtg
gcccgagtctggacgttccaacaagatgaagttatcgatagcgaattctttgttcgccgt
ctacagcaggcgcagagctggcgtgattggttggcacagcgtgatggtttgaatggctat
cgtcttattgccggtgaatccgacggcttgccgggtattaccatcgaccgtttccaaaac
tttctggtgttgcaattgctatcggcaggtgctgaacatcagcgtgcagcgctggtcagt
gcattacaacagtgctatccagaatgctcaatttatgatcgctccgatgtttcggtgcgt
aaaaaagaaggtctggaactgacacaaggtactgtctggggcgagatgcctccggctcta
ttacctatcactgagcacggtatgaaattgctggtagatattcagcatggtcataagaca
ggtttttatttagaccagcgagatagccgcctggcggcgcgtaattatgccgatggccgt
cgcgttctgaactgcttctcgtataccggggcctttgccgtggcagcgctgatgggaaat
tgccaacaagttatcagtgttgatacttcacaatccgtgttggatatcgctaaacaaaat
gttgagcttaatcagctagatctaagtaaagccgaatttattcgtgatgatgtattccaa
ttgctgcgcaactatcgcgcacaaggggaaaagtttgacatgatcatcatggatccaccg
aaatttgtggaaaataaaagccaactggccagtgcttgtcgcggctataaagatatcaat
atgttagcgatacagcttttacgccctggcggcatcttattaagtttctcttgttctggt
ttgatgcctacagatttattccagaaaattttagccgatgctgcgttagatgcaggccat
gatatacaatttatagagcagttccgtcaggcagcggatcacccggttatcgcaacatac
cctgaaggtttgtatctgaaaggatttgcgtgtcggataatgtga
DBGET
integrated database retrieval system
