Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_06890
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Entry
UGYR_06890 CDS
T03887
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UGYR_06890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yrb03019
]
UGYR_06890
Messenger RNA biogenesis [BR:
yrb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
UGYR_06890
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AKA38144
UniProt:
A0A085UBA8
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All DBs
Position
complement(1492975..1493502)
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AA seq
175 aa
AA seq
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MIDDDGYRPNVGIVICNRQGQVLWARRYGQHSWQFPQGGINPGETPEQAMYRELFEEVGL
NKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWFLLQLMCNDADINMQRSSTPE
FDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFAATVMPMQEVTLPRTPPAYRRKRG
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatgatgatggctaccgcccgaatgtgggtattgtaatttgtaatcggcagggg
caggtgttgtgggcaagacgttacggtcagcattcctggcagtttcctcaagggggaatc
aatcctggtgagacgccagagcaggcgatgtaccgcgaactgtttgaagaggtaggactg
aataagaaagatgtccgaatactggcttcaacccgtaactggttgcgttataaattacca
aaacgtttggtgcgttgggatacaaagccggtttgcatcggccaaaagcagagatggttt
ttgctgcaattaatgtgtaacgatgccgatatcaatatgcaacgcagtagcacgccggaa
tttgatggctggcgctgggtcagctactggtatccggtgcgtcaggtggtgtcattcaaa
cgggatgtctatcgtcgggtgatgaaggagtttgctgctacagtgatgcccatgcaggag
gtgacgctgcctcggacaccacccgcttatcgccggaaaagaggttaa
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