DNA Repair and Recombination Proteins - Ricinus communis (castor bean)

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     KO
 Eukaryotic type
   SSBR (single strand breaks repair)
     Direct repair
     BER (base exicision repair)
       DNA glycosylases
       AP endonucleases
       Long Patch-BER factors
         DNA polymerase delta complex
         DNA polymerase epsilon complex
         8279783 proliferating cell nuclear antigen
K04802 PCNA; proliferating cell nuclear antigen 
         8274974 flap endonuclease 1
K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] 
         8275235 DNA ligase 1
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
       Short Patch-BER factors
       Other BER factors
     NER (nucleotide excision repair)
       GGR (global genome repair) factors
       TCR (transcription coupled repair) factors
       TFIIH complex
       RPA (replication factor A)
       Other NER factors
         8285528 DNA excision repair protein ERCC-1 isoform X1
         8269025 DNA repair endonuclease UVH1 isoform X1
         8280552 DNA repair protein UVH3 isoform X1
         8275235 DNA ligase 1
         8273778 MMS19 nucleotide excision repair protein homolog isoform X1
         8260615 cullin-3A
         8284087 elongin-C
         8270717 uncharacterized protein LOC8270717
         8276927 transcription elongation factor B polypeptide 3
K10849 ERCC1; DNA excision repair protein ERCC-1 
K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-] 
K10846 ERCC5; DNA excision repair protein ERCC-5 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K15075 MET18; DNA repair/transcription protein MET18/MMS19 
K03869 CUL3; cullin 3 
K03872 ELOC; elongin-C 
K03873 ELOB; elongin-B 
K15077 ELA1; elongin-A 
     MMR (mismatch excision repair)
       Mismatch and loop recognition factors
       MutL homologs
       DNA polymerase delta complex
       RPA (replication factor A)
       RFC (replication factor C)
       Other MMR factors
         8279783 proliferating cell nuclear antigen
         8260087 exonuclease 1
         8267213 exonuclease 1
         8275235 DNA ligase 1
         8262837 WD repeat-containing protein 76
K04802 PCNA; proliferating cell nuclear antigen 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10746 EXO1; exonuclease 1 [EC:3.1.-.-] 
K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] 
K24755 WDR76; WD repeat-containing protein 76 
   DSBR (double strand breaks repair)
   TLS (translesion DNA synthesis) factors
   Check point factors
   Other factors with a suspected DNA repair function
 
 Prokaryotic type

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Last updated: March 29, 2024