KEGG Modules

Carbohydrate metabolism
Central carbohydrate metabolism
M00001 Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mvt00010 mvt01200 mvt01100]
M00002 Glycolysis, core module involving three-carbon compounds [PATH:mvt00010 mvt01200 mvt01230 mvt01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mvt00010 mvt00020 mvt01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mvt00010 mvt00020 mvt00620 mvt00785 mvt01200 mvt01210 mvt01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:mvt00020 mvt01200 mvt01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mvt00020 mvt01200 mvt01210 mvt01230 mvt01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mvt00020 mvt01200 mvt01210 mvt01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:mvt00030 mvt01200 mvt01100 mvt01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:mvt00030 mvt01200 mvt01100 mvt01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mvt00030 mvt01200 mvt01230 mvt01100 mvt01120]
M00580 Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:mvt00030 mvt01200 mvt01230 mvt01100 mvt01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:mvt00030 mvt00230 mvt01200 mvt01230 mvt01100]

Other carbohydrate metabolism
M00549 Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mvt00520 mvt01250 mvt01100]
M00909 UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mvt00520 mvt01250 mvt01100]

Energy metabolism
Carbon fixation
M00579 Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:mvt00430 mvt00620 mvt01200 mvt01100 mvt01120]

Methane metabolism
M00345 Formaldehyde assimilation, ribulose monophosphate pathway [PATH:mvt00030 mvt00680 mvt01200 mvt01230 mvt01100 mvt01120]

Nitrogen metabolism
Sulfur metabolism
M00176 Assimilatory sulfate reduction, sulfate => H2S [PATH:mvt00920 mvt01100 mvt01120]

Photosynthesis
ATP synthesis
M00151 Cytochrome bc1 complex respiratory unit [PATH:mvt00190 mvt01100]
M00155 Cytochrome c oxidase, prokaryotes [PATH:mvt00190 mvt01100]
M00416 Cytochrome aa3-600 menaquinol oxidase [PATH:mvt00190 mvt01100]
M00157 F-type ATPase, prokaryotes and chloroplasts [PATH:mvt00190 mvt01100]

Lipid metabolism
Fatty acid metabolism
M00082 Fatty acid biosynthesis, initiation [PATH:mvt00061 mvt01212 mvt01100]
M00083 Fatty acid biosynthesis, elongation [PATH:mvt00061 mvt01212 mvt01100]
M00086 beta-Oxidation, acyl-CoA synthesis [PATH:mvt00061 mvt00071 mvt01212 mvt01100]

Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
M00048 De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mvt00230 mvt01100]
M00049 Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mvt00230 mvt01232 mvt01240 mvt01100]
M00050 Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mvt00230 mvt01232 mvt01100]
M00053 Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mvt00230 mvt00240 mvt01232 mvt01100]

Pyrimidine metabolism
M00052 Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mvt00240 mvt01232 mvt01240 mvt01100]

Amino acid metabolism
Serine and threonine metabolism
M00018 Threonine biosynthesis, aspartate => homoserine => threonine [PATH:mvt00260 mvt01230 mvt01100 mvt01110]
M00621 Glycine cleavage system [PATH:mvt00260 mvt00630 mvt00785 mvt01200 mvt01100]
M00555 Betaine biosynthesis, choline => betaine [PATH:mvt00260 mvt01100]

Cysteine and methionine metabolism
M00021 Cysteine biosynthesis, serine => cysteine [PATH:mvt00270 mvt00920 mvt01200 mvt01230 mvt01100 mvt01110]
M00017 Methionine biosynthesis, aspartate => homoserine => methionine [PATH:mvt00270 mvt01230 mvt01100]

Branched-chain amino acid metabolism
M00019 Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mvt00290 mvt00770 mvt01210 mvt01230 mvt01100 mvt01110]
M00570 Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mvt00290 mvt01230 mvt01100]
M00432 Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mvt00290 mvt01210 mvt01230 mvt01100 mvt01110]

Lysine metabolism
Arginine and proline metabolism
M00844 Arginine biosynthesis, ornithine => arginine [PATH:mvt00220 mvt01230 mvt01100]
M00970 Proline degradation, proline => glutamate [PATH:mvt00330 mvt01100]
M00972 Proline metabolism [PATH:mvt00330 mvt01100]

Polyamine biosynthesis
Histidine metabolism
M00045 Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:mvt00340 mvt01100]

Aromatic amino acid metabolism
M00022 Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:mvt00400 mvt01230 mvt01100 mvt01110]
M00023 Tryptophan biosynthesis, chorismate => tryptophan [PATH:mvt00400 mvt01230 mvt01100 mvt01110]

Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00899 Thiamine salvage pathway, HMP/HET => TMP [PATH:mvt00730 mvt01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:mvt00740 mvt01240 mvt01100 mvt01110]
M00916 Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:mvt00750 mvt01240 mvt01100]
M00119 Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:mvt00770 mvt01240 mvt01100 mvt01110]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:mvt00770 mvt01240 mvt01100]
M00883 Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:mvt00785 mvt01240 mvt01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:mvt00790 mvt01240 mvt01100]
M00140 C1-unit interconversion, prokaryotes [PATH:mvt00670 mvt01240 mvt01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:mvt00860 mvt01240 mvt01100 mvt01110]
M00926 Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:mvt00860 mvt01240 mvt01100]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:mvt00130 mvt01240 mvt01100 mvt01110]

Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
M00096 C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:mvt00900 mvt01100 mvt01110]
M00364 C10-C20 isoprenoid biosynthesis, bacteria [PATH:mvt00900 mvt01100 mvt01110]

Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Aromatics degradation

Gene set
Pathogenicity
Drug resistance
M00704 Tetracycline resistance, efflux pump Tet38
M00725 Cationic antimicrobial peptide (CAMP) resistance, dltABCD operon [PATH:mvt01503]
M00726 Cationic antimicrobial peptide (CAMP) resistance, lysyl-phosphatidylglycerol (L-PG) synthase MprF [PATH:mvt01503]
M00700 Multidrug resistance, efflux pump AbcA

Plant pathogenicity
Symbiosis
Module set
Metabolic capacity