KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:pfit00010 pfit01200 pfit01230 pfit01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pfit00010 pfit00020 pfit01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfit00010 pfit00020 pfit00620 pfit00785 pfit01200 pfit01210 pfit01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:pfit00020 pfit01200 pfit01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pfit00020 pfit01200 pfit01210 pfit01230 pfit01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pfit00020 pfit01200 pfit01210 pfit01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pfit00030 pfit01200 pfit01100 pfit01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pfit00030 pfit01200 pfit01100 pfit01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pfit00030 pfit01200 pfit01230 pfit01100 pfit01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:pfit00030 pfit00230 pfit01200 pfit01230 pfit01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pfit00030 pfit01200 pfit01100 pfit01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pfit00740 pfit01240 pfit01100 pfit01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pfit00750 pfit01240 pfit01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pfit00760 pfit01240 pfit01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH:pfit00770 pfit01240 pfit01100]
M00572 Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pfit00780 pfit01240 pfit01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pfit00780 pfit01240 pfit01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pfit00785 pfit01240 pfit01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH:pfit00790 pfit00670 pfit01240 pfit01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pfit00790 pfit01240 pfit01100]
M00846 Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pfit00860 pfit01240 pfit01100 pfit01110]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pfit00860 pfit01240 pfit01100 pfit01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pfit00860 pfit01240 pfit01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pfit00130 pfit01240 pfit01100 pfit01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
M00745 Imipenem resistance, repression of porin OprD
M00641 Multidrug resistance, efflux pump MexEF-OprN
M00642 Multidrug resistance, efflux pump MexJK-OprM
Plant pathogenicity
Symbiosis
Module set
Metabolic capacity
M00615 Nitrate assimilation
M00616 Sulfate-sulfur assimilation
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