KEGG Modules
Pathway modules
Carbohydrate metabolism
Central carbohydrate metabolism
M00002 Glycolysis, core module involving three-carbon compounds [PATH:scyp00010 scyp01200 scyp01230 scyp01100]
M00003 Gluconeogenesis, oxaloacetate => fructose-6P [PATH:scyp00010 scyp00020 scyp01100]
M00307 Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:scyp00010 scyp00020 scyp00620 scyp00785 scyp01200 scyp01210 scyp01100]
M00009 Citrate cycle (TCA cycle, Krebs cycle) [PATH:scyp00020 scyp01200 scyp01100]
M00010 Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:scyp00020 scyp01200 scyp01210 scyp01230 scyp01100]
M00011 Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:scyp00020 scyp01200 scyp01210 scyp01100]
M00004 Pentose phosphate pathway (Pentose phosphate cycle) [PATH:scyp00030 scyp01200 scyp01100 scyp01120]
M00006 Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:scyp00030 scyp01200 scyp01100 scyp01120]
M00007 Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:scyp00030 scyp01200 scyp01230 scyp01100 scyp01120]
M00005 PRPP biosynthesis, ribose 5P => PRPP [PATH:scyp00030 scyp00230 scyp01200 scyp01230 scyp01100]
M00008 Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:scyp00030 scyp01200 scyp01100 scyp01120]
Other carbohydrate metabolism
Energy metabolism
Carbon fixation
Methane metabolism
Nitrogen metabolism
Sulfur metabolism
Photosynthesis
ATP synthesis
Lipid metabolism
Fatty acid metabolism
Sterol biosynthesis
Lipid metabolism
Nucleotide metabolism
Purine metabolism
Pyrimidine metabolism
Amino acid metabolism
Serine and threonine metabolism
Cysteine and methionine metabolism
Branched-chain amino acid metabolism
Lysine metabolism
Arginine and proline metabolism
Polyamine biosynthesis
Histidine metabolism
Aromatic amino acid metabolism
Other amino acid metabolism
Glycan metabolism
Glycan biosynthesis
Glycosaminoglycan metabolism
Lipopolysaccharide metabolism
Metabolism of cofactors and vitamins
Cofactor and vitamin metabolism
M00127 Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH: scyp00730 scyp01240 scyp01100]
M00125 Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH: scyp00740 scyp01240 scyp01100 scyp01110]
M00124 Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH: scyp00750 scyp01240 scyp01100]
M00115 NAD biosynthesis, aspartate => quinolinate => NAD [PATH: scyp00760 scyp01240 scyp01100]
M00120 Coenzyme A biosynthesis, pantothenate => CoA [PATH: scyp00770 scyp01240 scyp01100]
M00123 Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH: scyp00780 scyp01240 scyp01100]
M00881 Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH: scyp00785 scyp01240 scyp01100]
M00126 Tetrahydrofolate biosynthesis, GTP => THF [PATH: scyp00790 scyp00670 scyp01240 scyp01100]
M00880 Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH: scyp00790 scyp01240 scyp01100]
M00140 C1-unit interconversion, prokaryotes [PATH: scyp00670 scyp01240 scyp01100]
M00121 Heme biosynthesis, plants and bacteria, glutamate => heme [PATH: scyp00860 scyp01240 scyp01100 scyp01110]
M00122 Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH: scyp00860 scyp01240 scyp01100]
M00117 Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH: scyp00130 scyp01240 scyp01100 scyp01110]
M00116 Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH: scyp00130 scyp01240 scyp01100 scyp01110]
Biosynthesis of terpenoids and polyketides
Terpenoid backbone biosynthesis
Plant terpenoid biosynthesis
Macrolide biosynthesis
Enediyne biosynthesis
Type II polyketide biosynthesis
Polyketide sugar unit biosynthesis
Biosynthesis of other secondary metabolites
Biosynthesis of phytochemical compounds
Biosynthesis of beta-lactams
Biosynthesis of other antibiotics
Biosynthesis of other fungal compounds
Biosynthesis of other bacterial compounds
Xenobiotics biodegradation
Signature modules
Gene set
Pathogenicity
Drug resistance
Plant pathogenicity
Symbiosis
Module set
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