Genome informationT number | T01151 |
Org_code | afn |
Name | Acidaminococcus fermentans DSM 20731 |
Category | Type strain |
Annotation | yes |
Taxonomy | TAX: 591001 |
Lineage | Bacteria; Bacillota; Negativicutes; Acidaminococcales; Acidaminococcaceae; Acidaminococcus |
Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
Data source | GenBank (Assembly: GCA_000025305.1 Complete Genome) BioProject: 33685 |
Original DB | JGI |
Keywords | Animal pathogen, Human pathogen |
Comment | Anaerobic, nonsporulating, nonmotile, chemoorganotrophic and mesophilic coccus. Thrives mainly by glutamate fermentation via the 2-hydroxyglutarate pathway in the intestinal tract of homeothermic animals, utilizing glutamate, citrate, and trans-aconitate as sole energy sources, in the presence of sodium. Ammonia, acetate, butyrate, and hydrogen are the main end products of growth. Isolated from a pig alimentary tract.
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Chromosome | Circular |
Sequence | GB: CP001859 |
Length | 2329769 |
Statistics | Number of nucleotides: 2329769 Number of protein genes: 2026 Number of RNA genes: 82
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Created | 2010 |
Reference | PMID: 21304687 |
Authors | Chang YJ, Pukall R, Saunders E, Lapidus A, Copeland A, Nolan M, Glavina Del Rio T, Lucas S, Chen F, Tice H, et al. |
Title | Complete genome sequence of Acidaminococcus fermentans type strain (VR4). |
Journal | Stand Genomic Sci 3:1-14 (2010) DOI: 10.4056/sigs.1002553 |
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