SSDB Best Search Result

Entry:ate:Athe_2183 (451 a.a.)
Name:protein of unknown function UPF0027

Search Result : 210 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
vg:26626102 Brevibacillus phage Jenst; tRNA splicing li K14415     475     1130     0.408      453     
tte:TTE0709 conserved hypothetical protein              K14415     480     1028     0.414      464     
hth:HTH_1018 conserved hypothetical protein             K14415     480      898     0.345      458     
aae:aq_032 hypothetical protein                         K14415     480      875     0.354      460     
chy:CHY_0177 conserved hypothetical protein                        467      856     0.356      477     
nmr:Nmar_1453 protein of unknown function UPF0027       K14415     482      849     0.350      452     
ape:APE_1758.1 conserved hypothetical protein           K14415     481      849     0.350      469     
pai:PAE0998 conserved hypothetical protein              K14415     484      845     0.353      467     
mma:MM_1538 Replication factor C subunit                K14415     500      843     0.338      458     
mac:MA_0266 conserved hypothetical protein              K14415     500      843     0.344      457     
tth:TT_C1426 rtcB protein                               K14415     476      837     0.355      470     
mmp:MMP1392 Protein of unknown function UPF0027         K14415     480      837     0.346      457     
mmg:MTBMA_c01830 conserved hypothetical protein         K14415     482      834     0.339      457     
tma:TM1357 conserved hypothetical protein               K14415     474      829     0.335      465     
tac:Ta0279 conserved hypothetical protein                          466      828     0.340      477     
mba:Mbar_A1252 conserved hypothetical protein           K14415     500      827     0.344      457     
mth:MTH_1597 conserved protein                          K14415     488      826     0.344      457     
tko:TK0358 RNA terminal phosphate cyclase operon orfB h K14415     482      807     0.325      474     
afu:AF_0862 conserved hypothetical protein              K14415     482      790     0.311      472     
mse:Msed_1752 protein of unknown function UPF0027       K14415     460      775     0.341      475     
sat:SYN_02046 RTCB protein                              K14415     482      772     0.325      459     
mxa:MXAN_5426 conserved hypothetical protein, UPF0027 f K14415     497      771     0.334      452     
sto:STK_12920 hypothetical protein                      K14415     483      769     0.338      476     
mtc:MT2707 conserved hypothetical protein               K14415     432      765     0.335      439     
ame:409653 tRNA-splicing ligase RtcB homolog            K14415     506      761     0.332      446     
sai:Saci_1317 universally conserved protein             K14415     482      759     0.328      473     
aag:5577915 tRNA-splicing ligase RtcB homolog           K14415     506      758     0.342      448     
spu:588300 tRNA-splicing ligase RtcB homolog            K14415     508      756     0.344      451     
mtu:Rv2631 RNA-splicing ligase RtcB                     K14415     432      756     0.333      439     
dme:Dmel_CG9987 RtcB RNA ligase                         K14415     506      753     0.335      478     
sct:SCAT_5020 conserved protein of unknown function     K14415     481      751     0.322      457     
aga:1277815 RNA-splicing ligase RtcB homolog            K14415     506      751     0.339      448     
stp:Strop_2399 protein of unknown function UPF0027      K14415     472      751     0.321      458     
tva:4766036 RNA ligase (ATP) protein                               498      748     0.336      440     
bmor:101739631 RNA-splicing ligase RtcB homolog         K14415     506      746     0.335      448     
xtr:595066 tRNA-splicing ligase RtcB homolog            K14415     505      744     0.331      481     
xla:779280 uncharacterized protein LOC779280            K14415     505      743     0.331      481     
tca:658169 tRNA-splicing ligase RtcB homolog            K14415     506      740     0.323      480     
nve:5520396 tRNA-splicing ligase RtcB homolog           K14415     505      740     0.333      448     
ola:101164466 tRNA-splicing ligase RtcB homolog         K14415     505      739     0.333      447     
sshi:J5U23_02510 RNA-2',3'-PO4:RNA-5'-OH ligase         K14415     482      738     0.320      472     
mca:MCA0195 conserved hypothetical protein              K14415     476      738     0.334      458     
dre:406376 RNA-splicing ligase RtcB homolog             K14415     505      737     0.333      483     
cin:100176177 tRNA-splicing ligase RtcB homolog         K14415     504      736     0.335      448     
cel:CELE_F16A11.2 RNA-splicing ligase RtcB homolog      K14415     505      735     0.329      447     
sso:SSO0966 Conserved hypothetical protein              K14415     482      735     0.324      475     
pto:PTO0605 RtcB protein                                           470      729     0.322      459     
tgu:100227339 tRNA-splicing ligase RtcB homolog         K14415     505      728     0.325      480     
cpoc:100734763 tRNA-splicing ligase RtcB homolog        K14415     505      727     0.325      480     
mcc:717258 tRNA-splicing ligase RtcB homolog            K14415     505      727     0.325      480     
ptex:113433052 tRNA-splicing ligase RtcB homolog        K14415     505      726     0.326      481     
mdo:100016063 RNA 2',3'-cyclic phosphate and 5'-OH liga K14415     505      726     0.325      480     
gsu:GSU1684 protein of unknown function UPF0027         K14415     485      726     0.323      458     
gme:Gmet_1619 protein of unknown function UPF0027       K14415     485      725     0.315      463     
cjc:100408961 RNA-splicing ligase RtcB homolog          K14415     505      724     0.323      480     
cge:100753929 RNA-splicing ligase RtcB homolog isoform  K14415     505      724     0.323      480     
mmu:28088 RNA-splicing ligase RtcB homolog              K14415     505      724     0.323      480     
rno:362855 RNA-splicing ligase RtcB homolog             K14415     505      724     0.323      480     
dne:112993961 tRNA-splicing ligase RtcB homolog isoform K14415     505      723     0.323      480     
oas:101118007 RNA-splicing ligase RtcB homolog isoform  K14415     505      723     0.323      480     
hsa:51493 RNA-splicing ligase RtcB homolog              K14415     505      723     0.323      480     
fca:101090197 RNA-splicing ligase RtcB homolog isoform  K14415     505      723     0.323      480     
ecb:100054153 tRNA-splicing ligase RtcB homolog         K14415     505      723     0.323      480     
ptr:458782 RNA-splicing ligase RtcB homolog             K14415     505      723     0.323      480     
bta:525106 RNA-splicing ligase RtcB homolog             K14415     505      723     0.323      480     
ssc:733658 tRNA-splicing ligase RtcB homolog            K14415     505      723     0.323      480     
ocu:100346526 RNA-splicing ligase RtcB homolog          K14415     505      722     0.323      480     
rfq:117028426 tRNA-splicing ligase RtcB homolog         K14415     505      721     0.327      483     
gga:418064 RNA-splicing ligase RtcB homolog             K14415     505      721     0.323      480     
cfa:474524 RNA-splicing ligase RtcB homolog isoform X2  K14415     450      721     0.329      447     
amj:102577238 RNA 2',3'-cyclic phosphate and 5'-OH liga K14415     505      720     0.324      481     
apla:101795314 LOW QUALITY PROTEIN: RNA-splicing ligase K14415     505      720     0.323      480     
pmur:107284725 tRNA-splicing ligase RtcB homolog        K14415     505      718     0.322      481     
ehi:EHI_184560 hypothetical protein                     K14415     535      715     0.334      473     
ddi:DDB_G0278481 UPF0027 family protein                 K14415     508      713     0.322      478     
det:DET0823 conserved hypothetical protein              K14415     486      713     0.319      464     
cre:CHLRE_11g467766v5 uncharacterized protein           K14415     505      710     0.319      476     
sgu:SGLAU_02850 RNA-splicing ligase                     K14415     469      709     0.315      457     
cte:CT0601 conserved hypothetical protein               K14415     465      705     0.319      457     
hvo:HVO_2712 tRNA-splicing ligase RtcB                  K14415     486      704     0.311      470     
pfa:PF3D7_1105700 uncharacterized protein               K14415     506      699     0.319      479     
mja:MJ_0682 conserved hypothetical protein              K14415     968      692     0.337      389     
clv:106145813 LOW QUALITY PROTEIN: tRNA-splicing ligase K14415     469      691     0.316      474     
tgo:7897124 DNA segment, Chr 10, Wayne State University K14415     519      688     0.321      449     
pfu:PF1615 hypothetical protein                         K14415     970      686     0.317      391     
sur:STAUR_0111 conserved uncharacterized protein        K14415     450      685     0.328      436     
lpn:lpg2201 replication factor C subunit (activator I)  K14415     477      685     0.315      461     
tps:THAPSDRAFT_41953 hypothetical protein               K14415     480      683     0.323      449     
dde:Dde_2089 protein of unknown function UPF0027                   478      682     0.320      453     
pab:PAB0383 rtcB homolog, intein containing             K14415     916      663     0.316      393     
pho:PH1602 871aa long hypothetical protein              K14415     871      654     0.320      394     
hal:VNG_1454C conserved hypothetical protein            K14415     500      650     0.309      460     
mka:MK1682 Uncharacterized conserved protein            K14415     988      644     0.318      418     
ecu:ECU01_1120 uncharacterized protein                  K14415     477      634     0.312      459     
avn:Avin_46150 conserved hypothetical protein           K14415     476      627     0.300      457     
ral:Rumal_2169 protein of unknown function UPF0027      K14415     411      584     0.327      437     
sml:Smlt4533 conserved hypothetical protein             K14415     406      584     0.313      434     
alv:Alvin_3164 protein of unknown function UPF0027      K14415     398      580     0.319      451     
syp:SYNPCC7002_A2515 Uncharacterized protein family UPF K14415     393      572     0.318      431     
xcc:XCC3883 conserved hypothetical protein              K14415     409      565     0.309      408     
xac:XAC3965 conserved hypothetical protein              K14415     407      553     0.303      412     
ava:Ava_3418 Protein of unknown function UPF0027        K14415     393      545     0.304      424     
ana:all3526 hypothetical protein                        K14415     393      544     0.304      424     
ssy:SLG_10960 conserved hypothetical protein            K14415     408      539     0.299      431     
esa:ESA_00065 hypothetical protein                      K14415     408      537     0.301      428     
sco:SCO3299 conserved hypothetical protein              K14415     397      531     0.294      429     
eco:b3421 RNA-splicing ligase                           K14415     408      529     0.290      428     
ecs:ECs_4264 RNA-splicing ligase                        K14415     408      527     0.290      428     
plu:plu4307 Protein RtcB                                K14415     408      525     0.296      452     
amd:AMED_8879 conserved hypothetical protein            K14415     396      524     0.291      429     
scl:sce7156 rtcb protein                                K14415     408      524     0.298      426     
rha:RHA1_ro06876 conserved hypothetical protein         K14415     401      524     0.289      429     
sro:Sros_5339 conserved hypothetical protein            K14415     384      523     0.312      407     
pae:PA4583 hypothetical protein                         K14415     404      523     0.300      410     
ksk:KSE_54190 hypothetical protein                      K14415     397      522     0.301      429     
cro:ROD_37281 conserved hypothetical protein            K14415     390      521     0.289      425     
acb:A1S_2839 hypothetical protein                       K14415     401      521     0.308      448     
stm:STM3519 putative cytoplasmic protein                K14415     405      521     0.288      434     
sfl:SF3443 hypothetical protein                         K14415     408      520     0.285      428     
sen:SACE_3596 hypothetical protein                      K14415     396      517     0.280      428     
pfr:PFREUD_23600 Hypothetical protein                   K14415     402      513     0.302      424     
kfl:Kfla_6625 protein of unknown function UPF0027       K14415     397      513     0.293      423     
mar:MAE_13610 hypothetical protein                      K14415     393      513     0.308      425     
pfl:PFL_2304 RtcB family protein                        K14415     408      509     0.299      405     
sgr:SGR_4185 conserved hypothetical protein             K14415     397      508     0.294      428     
reu:Reut_B5869 Protein of unknown function UPF0027      K14415     409      508     0.298      430     
ase:ACPL_2722 uncharacterized protein                   K14415     386      507     0.289      425     
sma:SAVERM_4753 hypothetical protein                    K14415     397      502     0.285      431     
pmr:PMI3510 conserved hypothetical protein              K18148     382      501     0.281      441     
tfu:Tfu_1357 conserved hypothetical protein             K14415     395      497     0.289      426     
cgl:Cgl3001 Uncharacterized ACR                         K14415     383      494     0.299      431     
nfa:NFA_13690 hypothetical protein                      K14415     405      479     0.279      430     
rso:RSc0224 rtcb protein                                K14415     406      478     0.272      430     
phe:Phep_0086 protein of unknown function UPF0027       K14415     484      470     0.293      423     
smm:Smp_074870 hypothetical protein                                272      468     0.376      229     
cvi:CV_1037 rtcb protein                                K14415     406      467     0.267      423     
reh:H16_B0555 RtcB Protein                              K14415     409      457     0.279      423     
tbr:Tb10.26.0830 hypothetical protein, conserved                   486      457     0.280      478     
cau:Caur_0538 protein of unknown function UPF0027       K14415     438      456     0.278      425     
bha:BH1789 BH1789; unknown conserved protein in others  K14415     407      455     0.287      432     
tcr:509641.20 hypothetical protein                                 449      453     0.279      441     
cdi:DIP2025 Conserved hypothetical protein              K14415     434      434     0.297      408     
pjd:Pjdr2_4667 protein of unknown function UPF0027      K14415     412      427     0.280      443     
dra:DR_0430 rtcB protein                                K14415     470      426     0.299      408     
cdf:CD630_21460 conserved hypothetical protein, UPF0027 K18148     355      423     0.288      420     
bfr:BF2711 conserved hypothetical protein               K14415     465      423     0.284      401     
tde:TDE_0804 conserved hypothetical protein             K14415     375      421     0.301      382     
bth:BT_1455 protein rtcB                                K14415     465      421     0.287      404     
eca:ECA3616 conserved hypothetical protein              K18148     373      410     0.287      429     
cth:Cthe_0250 protein of unknown function UPF0027       K14415     396      408     0.276      406     
npu:Npun_R6421 protein of unknown function UPF0027                 715      404     0.283      371     
btk:BT9727_2736 conserved hypothetical protein          K14415     395      403     0.283      406     
sty:STY0359 conserved hypothetical protein              K18148     379      398     0.262      428     
ctt:CtCNB1_3342 hypothetical conserved protein          K18148     384      393     0.253      446     
ban:BA_2999 conserved hypothetical protein              K14415     395      391     0.273      406     
lmo:lmo0257 hypothetical protein                        K14415     392      368     0.296      412     
cac:CA_C3383 Uncharacterized conserved protein, RtcB/UP K18148     345      365     0.277      426     
dvu:DVU_0853 conserved hypothetical protein             K14415     423      364     0.267      453     
dsy:DSY1431 hypothetical protein                        K14415     400      362     0.267      431     
ppp:112279343 uncharacterized protein                              503      354     0.248      447     
smo:SELMODRAFT_2870 hypothetical protein                           360      349     0.262      427     
rer:RER_24640 hypothetical protein                                 256      314     0.332      223     
lma:LMJF_33_0560 hypothetical protein                              351      299     0.281      292     
hma:rrnAC0783 unknown                                   K14415     487      281     0.240      470     
sil:SPO0160 hypothetical protein                                   470      196     0.217      415     
gla:GL50803_0023602 tRNA-splicing ligase RtcB                      582      191     0.249      225     
cal:CAALFM_C406430CA hypothetical protein               K18798     543      160     0.231      386     
mta:Moth_1461 GerA spore germination protein            K06295     558      133     0.227      247     
rru:Rru_A1685 Small GTP-binding protein domain          K03665     418      133     0.257      152     
bhe:BH04170 hypothetical protein                                   564      131     0.273      242     
tex:Teth514_1518 Xylose isomerase domain protein TIM ba K01151     292      125     0.226      257     
gmx:100775897 dnaJ protein homolog 1                    K09510     339      124     0.240      312     
vfi:VF_2309 5,10-methylenetetrahydrofolate reductase    K00297     295      124     0.201      283     
vpa:VPA0941 anaerobic ribonucleoside-triphosphate reduc K21636     706      124     0.217      369     
yli:2909905 Candidapepsin-8                                        385      123     0.218      266     
son:SO_3542 D-xylulose 5-phosphate/D-fructose 6-phospha K01621     788      123     0.255      200     
bsu:BSU11300 transcriptional activator protein med      K05519     317      123     0.272      195     
mdm:103401503 mitochondrial outer membrane protein pori K15040     276      122     0.206      228     
ani:ANIA_01957 hypothetical protein                     K15507     617      122     0.245      261     
cpy:Cphy_2179 Cysteine desulfurase                      K04487     373      120     0.209      321     
bpe:BP0190 probable orn/arg/lys decarboxylase           K01584     756      119     0.199      331     
aor:AO090120000008 unnamed protein product; predicted p            533      118     0.222      248     
vch:VC_1069 glyceraldehyde 3-phosphate dehydrogenase    K25224     333      118     0.198      323     
osa:4326364 uncharacterized protein                     K09510     349      117     0.269      212     
ccr:CC_2478 acyl-CoA dehydrogenase family protein                  407      117     0.227      216     
pti:PHATRDRAFT_32087 hypothetical protein                          297      115     0.228      281     
fgr:FGSG_12952 2-isopropylmalate synthase               K01649     348      115     0.234      248     
uma:UMAG_06133 hypothetical protein                                570      115     0.297      101     
vvu:VV1_2042 hypothetical protein                                  394      115     0.252      107     
ncr:NCU04703 hypothetical protein                                  305      114     0.261      111     
xom:XOO0711 putative glycosyltransferas                            308      114     0.210      252     
cne:CND01440 conserved hypothetical protein             K21543     453      114     0.223      184     
nta:107787394 lanC-like protein GCL2                               407      112     0.262      225     
sno:Snov_1284 FAD dependent oxidoreductase                         448      111     0.230      161     
spo:2542501 transport protein Ugo1                      K17967     421      109     0.223      349     
mmi:MMAR_4543 5'-phosphoribosylglycinamide formyltransf K11175     215      104     0.286      105     
brh:RBRH_02220 Alpha/beta hydrolase                     K07018     223      103     0.317      60      
tru:101068870 pollen-specific leucine-rich repeat exten            320      102     0.247      162     
swi:Swit_1761 AMP-dependent synthetase and ligase       K02182     550      102     0.213      244     
psb:Psyr_0186 HAD-superfamily hydrolase, subfamily IA,  K20862     230      101     0.278      97      
ath:AT2G41010 calmodulin (CAM)-binding protein of 25 kD            238      101     0.248      165     
sme:SM_b21288 probable xanthine dehydrogenase protein   K07402     288      101     0.261      211     
enc:ECL_03208 phage lysozyme                            K01185     164       97     0.224      134     
rle:pRL100107 hypothetical protein                                 220       97     0.239      159     
pif:PITG_07712 hypothetical protein                                130       94     0.259      81      
rcp:RCAP_rcc03484 conserved hypothetical protein                   131       94     0.216      102     
afr:AFE_2983 prevent-host-death family protein                      80       92     0.333      66      
bmf:BAB1_1127 conserved hypothetical protein                        66       86     0.311      45      
bms:BR1103 hypothetical protein                                     66       86     0.311      45      
bme:BMEI0879 hypothetical protein                                   66       86     0.311      45      

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