Croceibacterium atlanticum: WYH_01045
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Entry
WYH_01045 CDS
T03925
Symbol
ligB_1
Name
(GenBank) Protocatechuate 4,5-dioxygenase beta chain
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
aay
Croceibacterium atlanticum
Pathway
aay00362
Benzoate degradation
aay00624
Polycyclic aromatic hydrocarbon degradation
aay00627
Aminobenzoate degradation
aay01100
Metabolic pathways
aay01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
aay00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
WYH_01045 (ligB_1)
00627 Aminobenzoate degradation
WYH_01045 (ligB_1)
00624 Polycyclic aromatic hydrocarbon degradation
WYH_01045 (ligB_1)
Enzymes [BR:
aay01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
WYH_01045 (ligB_1)
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
AKH42092
UniProt:
A0A0F7KS39
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All DBs
Position
complement(1089958..1090812)
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AA seq
284 aa
AA seq
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MSTISGGIFTSHVPGIGNAIAKGLQQDPYWKPFFDGFQPVHRWLDRVKPDVAVVFYNDHG
LNFFLDAMPTFAIGAAPEYRHEDEGWGIAFPKPYPGIPELSWQIIEEVVESEFDPVMCQK
MLVDHAVAVPFELAWPDAEAFPVKLVPIAINTVQHPLPSPKRCRDLGLAVGRALRAWEGD
EKIVVMGTGGLSHQLEGKRAGHLNVDYDKFCMDNLVSDPDALLKHSTLEIVELAGSQGVE
ILNWIAARAALGDDCREISRNYHIPISNTAAATMLVETREAVSA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgagcactatcagcggcggcatttttaccagccacgttcccggcatcggcaacgcaatt
gccaagggcctgcagcaggatccctactggaagccctttttcgatggttttcagccggtc
catcgctggctggatcgcgtgaagccggacgtggccgtggtgttctacaacgatcatggc
ctgaacttcttcctcgacgcgatgccgactttcgccattggcgcggcgccggaatatcga
cacgaagatgaaggctggggcattgcctttcccaaaccttatccgggcatccccgaactt
tcatggcagattatcgaagaagtggtcgaatcagagtttgatccggtgatgtgccagaag
atgctggtggatcatgccgtggccgttcccttcgaactggcctggccggatgcggaagcc
ttcccggtcaagctggtgccgattgccatcaataccgtgcagcatcccttgcccagcccg
aaacgctgccgcgatctgggtctggccgtcggccgcgccctgcgcgcgtgggaaggcgat
gaaaagatcgtggtgatgggcactggcggcctgtcgcaccagctggaaggcaagcgcgcc
ggccatctgaatgtcgattatgacaagttttgcatggataatctcgtgtctgacccggat
gccctgctgaagcattccacgctggaaatcgtcgaactagcgggtagccagggcgttgaa
atcctcaactggatcgccgcacgcgcagcgctgggcgatgattgccgcgagatttcacgc
aattatcacattccgatttccaatacggcggcggcgaccatgctggtcgaaacgcgcgaa
gccgtcagcgcgtga
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