Akkermansia biwaensis: Abiwalacus_06270
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Entry
Abiwalacus_06270 CDS
T08790
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
abiw
Akkermansia biwaensis
Pathway
abiw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
abiw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Abiwalacus_06270 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
abiw03400
]
Abiwalacus_06270 (nth)
Enzymes [BR:
abiw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Abiwalacus_06270 (nth)
DNA repair and recombination proteins [BR:
abiw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Abiwalacus_06270 (nth)
Prokaryotic type
Abiwalacus_06270 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
BDL43053
LinkDB
All DBs
Position
complement(794010..794648)
Genome browser
AA seq
212 aa
AA seq
DB search
MDKKERASVVQEELMRLYENPPIPLTHHDPYTLLVAVLLSAQCTDKRVNLVTPALFALAS
TPEEMARQDVEAVREIVRPCGLSERKASAIVNLSRILAEQYGGQVPCDFQALESLPGVGH
KTASVVMAQAFGVPAFPVDTHIFRLSRLWGLSSGKTVEAVERDLKALYPQNTWGDLHLRI
VLYGREYCPARGCGGSCPICSRLNRTEGFTDV
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaaagaacgggcctccgtcgtacaggaggaattgatgaggctgtatgaaaat
ccgcccattccccttacccaccatgatccctataccctgctggttgccgttcttttgtcc
gcccagtgtacggacaagcgtgtgaacctggttactccggccctgtttgccctggcttcc
acgccggaggaaatggcccggcaggacgtggaggccgtgcgtgaaatcgtgcgcccctgc
ggcctttcggagaggaaggcttccgccatcgtgaacctgagcaggattctggcggagcag
tacggcgggcaggtcccctgcgacttccaggcgctggaatcactgcccggcgtgggtcat
aagacggcctccgttgtcatggcgcaggcgttcggcgttccggcgtttccggtggatacc
cacatcttccgcctgtcgcgcctgtgggggctgagcagcgggaaaacggtggaggccgtg
gagcgcgatctgaaagctctttaccctcaaaacacatggggggatctccatttgcgcatc
gtgctgtacggccgggaatattgccccgccagagggtgcggagggagctgtcccatctgc
agccggctgaaccggacggaggggtttacagacgtttga
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