Astyanax mexicanus (Mexican tetra): 103024074
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Entry
103024074 CDS
T05042
Symbol
shoc2
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
amex
Astyanax mexicanus (Mexican tetra)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
Motif
Other DBs
NCBI-GeneID:
103024074
NCBI-ProteinID:
XP_022521169
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MSSALGKDKDCKEKEPKAPSGKEREKEPKAPGSLGKEGKDSKTKGKDAKDGKKDAGGARP
AVAFSVDNTIKRPNPAQGIRKKSSNAEVIKELSKCREENSTRLDLSKRSIHLLPSSIKEL
TQLTELYLYSNKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLR
EIPAVVYRVTSLTTLYLRFNRITTVEKDIRNLAKLTMLSIRENKIKQLPAEIGELCNLIT
LDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSINRLGLRYNRLSAIPRS
LAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNM
EHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDIC
GLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQ
LTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSK
LSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtgctttaggcaaagacaaggactgcaaggagaaggagccgaaagctccgtcc
ggcaaggagcgggagaaggagccgaaggcgcccggcagcttgggaaaagagggcaaggac
tccaaaaccaaagggaaagatgccaaagacggtaagaaggacgccggcggagcgcgcccc
gccgtggccttctccgtggacaacacgataaagcggccgaacccggcgcaaggcatccgc
aagaagtccagcaacgccgaggtgatcaaggagctcagcaagtgccgggaggagaactcc
acgcgtctggacctgtccaagcgctccatccacctgctaccctcctccatcaaggagctg
acgcagctgactgagctttacctgtacagcaacaagctgcagagcctgccgccggaggtg
ggctgcctgtcgggcctggtgacgctggccctgagcgagaattccctcaccagcctgccc
gactcgctggacaacctgaagaagctgcgcatgctggacctgcggcacaacaagctgcgg
gagatcccggccgtggtgtaccgcgtcacctcgctcaccacgctctacctgcgcttcaac
cgcatcaccacggtcgagaaggacatccgcaacctggccaagctcaccatgctcagcatc
cgcgagaacaagatcaagcagctgcctgccgagatcggtgagctgtgtaacctgatcact
ctggacgtggcccacaatcagctggaacaccttcctaaagagatcggcaactgcacacag
atcaccaatttggacttacagcacaacgagcttctggacttacctgagactataggcaat
ctgtcgagcataaaccgcctgggtctgcggtacaaccggctgtcagcaatcccccgatcg
ttagcgaagtgccgggagctggaggagctaaacctagaaaacaacaacatttctgtgcta
cctgagggtctgctctcgagtctggtgaatctgaccagtctgactttggcccgaaactgt
tttcagtcgtatccggtgggcgggccttcacagttctccaccatctactctcttaacatg
gagcacaaccgcattaacaagatcccgttcggcatcttctcccgtgccaaagtcctcagc
aagctcaacatgaaggataaccagctgacgtcgctgcctctggacttcggcacatggacc
agtatggtggagctgaacctggccaccaaccagctgaccaagatccctgaggatatctgc
ggccttgcgtcccttgaggttctcatactgtccaataatctcctgaagaagttacctcat
ggaattggtaacctgaggaaactccgagagctcgacctggaagagaacaagctggagtct
ctccccaacgagatcgcctaccttaaagacctgcagaaacttgttttgaccaataaccag
ttgaccacgttgccaagagggatcggtcacctgaccaacctgactcacctggggctggga
gagaacctcctgcagcacctgcctgaggagatcggcacactggagaacctggaggagctt
tacctgaacgacaaccccaacctgcacagcctgccgttcgagctggcactgtgcagcaag
ctctccatcatgagcatcgagaactgccccctcagccacctcccgccgcagatcgtcgcc
ggtggcccttccttcatcatccagtttctgaagatgcagggaccctaccgcgccatggtg
taa
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