Astyanax mexicanus (Mexican tetra): 103030824
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Entry
103030824 CDS
T05042
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amex03016
]
103030824 (tsen54)
Transfer RNA biogenesis [BR:
amex03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
103030824 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
103030824
NCBI-ProteinID:
XP_022521927
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
MATKQAHAEAARAERSEELLSPSELFHARSRSHKIPVRGQKEFLPTGSEQQKTHLQKSLQ
EHWTLVAEERVERLGNLVNAEWIPEEKLVKLQSPAGKFWQTMGFSHCGKQCLLPEEALYL
MECGNVQVFYQDLPLSIQEGYERFLSPETVTLHQYQVFGHLKRLGYVVNRFDPSTVPSLY
ERQLNLPLSRDRQNKQLKRKRSHSPGSRSCEKQTSIPQEDTAVGPCEDVLTGEPHQTIQS
KKEQDEPMDSGSHVDRAPERNWWTAASSQSRSMTGLPAALPWDFRLISFPDLGSSRAART
CLAAPDPELLPGALQVGECKMASWLTKLNLKEEKLSRRERERQRERDRYKRSVNDDREVR
RCTNWAEYLELMKKRRRQRCKERPAHLWEKDVTPLSQPGLCTSHRELLEEVSIIQSSHLL
EEASKLPQLDQWRIIFNVYQPDTVADFKKSHPGNPYTRMCVCSFDGPVPDLRVMKQLSFQ
SADIPVTFAVVDHGDISFYCFKEFKLPSDFY
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaaacaagctcacgcggaagctgcacgcgcggaacgcagtgaggagttatta
agcccatcagagctgtttcatgctcggtcacgaagtcataagattcctgtgagagggcag
aaggagttcttgcccactggctctgagcagcagaagacacaccttcagaagagtcttcag
gagcactggactctggtggcagaggaacgtgtggagagacttgggaaccttgtaaatgca
gaatggattccagaggaaaagcttgtgaagctgcagtcaccagcagggaaattctggcag
actatgggcttttcacattgtggaaaacagtgcttacttccagaagaggctctatacctc
atggagtgtggcaatgtgcaggtgttctaccaggatcttcccctgtctattcaggagggg
tatgaacgcttcctttctcctgaaactgtgactctccatcagtaccaggtgtttggccat
ttgaagagactgggatatgtggtaaacagatttgatcctagcacagtgccgtctctgtat
gaacgacagctgaatttgccactttcccgtgacaggcagaataagcagctgaagaggaag
cgcagccacagccctggctctaggtcatgtgaaaaacaaaccagtataccccaagaggat
acagctgtgggtccatgtgaagatgttctgactggagagccacaccagacaatccagtca
aaaaaagagcaagacgagccaatggactccggctcacatgtggatagagctcctgaaagg
aactggtggacagctgcatcaagccaatccaggtctatgacaggcctgcctgcagcccta
ccgtgggacttcaggttaatctcttttcctgaccttggctcgtcccgggcagcccgtacc
tgcctggcggctcctgaccccgagttactccccggagctctgcaagtgggagagtgcaag
atggcctcctggctgaccaaactaaatctgaaagaagagaaattgtcccggcgggagcga
gagaggcagagggagagggatcggtacaagcgcagcgttaatgatgaccgagaggtgcgt
cgctgcacgaactgggccgagtatttagagctaatgaagaagaggaggagacaacggtgt
aaggaaagacccgcccacctttgggaaaaggatgtaacacctctcagtcagcctggactg
tgcacttcacaccgtgaactgctggaggaggtcagcattatccagtcttctcatttgctg
gaagaagcgtccaagttacctcagttagaccagtggaggatcattttcaatgtttaccag
cctgacacagtggctgacttcaagaagagtcaccctggaaatccctatactcgcatgtgt
gtttgcagctttgacggtccagtgcctgacctgcgtgttatgaagcagctgtcgttccag
agcgcagacatccctgtaacatttgcagttgtggaccatggagatatctccttctactgc
ttcaaggagtttaagctgcccagtgatttctactga
DBGET
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