Astyanax mexicanus (Mexican tetra): 103045879
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Entry
103045879 CDS
T05042
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103045879 (supt6h)
03036 Chromosome and associated proteins [BR:
amex03036
]
103045879 (supt6h)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103045879 (supt6h)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
103045879 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
S1
Spt6_S1
HHH_3
Tex_N
HHH_9
SH2
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
103045879
NCBI-ProteinID:
XP_022531795
Ensembl:
ENSAMXG00000006025
LinkDB
All DBs
Position
14:6030228..6049967
Genome browser
AA seq
1743 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEDDEDEEEEENTEDQDEHGNLKGLIDDGND
DDDDEEVEDEEEADENRSEGEGGGGGGGDGGGDSDSGDEVRHRRRKRAYDDVLDDDDLDL
IEENLGVKVKRRKKKYSRVKTMDDEGEDDEKDLIADEIFTGDGDGELEEGEAVERPHPGD
DEEEEEEEESDIDDFIVDDDGQPLTKKKGKKFTGYTDAALQEAQEIFGGDFDFAEFDTEA
YDRAEEEEEDQDDEAWDRPKKQTKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPE
RFQLRAIPVKPAEDDELEEEAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRRGPSTIA
KIKEALNFMRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLF
QKMQSYQFEQISADPDKPLADAVRPLDTADMERLKDVQSMDELSDVYNHFLLYYGRDIPR
MQNSAKPTKKKLKKIKEVSEEDGEEAEVEEEEEEEEEQKGPDLKQASRRDMYSICQSAGL
DGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFSTPEAVLEGTRYMV
AMQIAREPLVRHVLRQTFQERAKINIKPTKKGKKDIDEAHYAYSFKYLKNKPVKELNGDQ
FLKICMAEDEGLLSIDICIDLVGVKGYGGDQTYFDEIKQFYYRDEFSHQVQEWNKQRMLA
IERALQQFLYPQMAKELKNKLVAEAKDNIVKSCCRKLYNWLKVAPYRPDQQIEEDDDLMD
ESQGKGIRVLGVAFASGRDTPVFCALINGEGEVVDFLRLPYFLKRRNAWREEEREKKLQD
IENLKKFLLSKKPHVVAVAGENRDAHMLIEDIKRTVAELEQDSSLPAVGVELVDNELATL
YMNSKKSETDFRDYPPLLRQAVSVARKIQDPLVEFAQVCSTDEDILCLKLHPLQEHVVKE
ELLGALYCEFINRVNEVGVDVNRAIAHPYTQSLVQYVCGLGPRKGSHLLKILKQNNTRLE
NRTQLVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVD
ALEYDESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSC
RYKDLRAPYRPPNTEEVFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDE
TGLWQCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRTRLDNAVMGFIPTKFLSDKVVKH
PEERVKVGMTVHCRIMKIDIEKFNVDLTCRSSDLADKNNEWKLPKDTYYDFDAETDDVKQ
EEELKKKQQRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVVIRPSSKGENHLTVTWK
VADGIYQHVDVREEGKENAFSLGHTLWINTEEFEDLDEITARYVQPMAAFARDLLSHKYF
QECNGGDRKKMEELLVRCKKEKPTFIPYFVSACRDLPGKFLLGYQPRGKPRIEYVTITPD
GFRYRSQIFPTVNGLFRWFKDHYQEPVPGITPSSSSRTRTPASVNATPANINIADLTRAV
NALPRNMTSQMFNAIAAVTGQGQNPNTTPAQWASSQYGYSGGSSAGGGGSSSAYHVFATP
QQPMATPMMTPSYSYTTPGQQQAMTTPQYPSSTPQSSHGHHQHASSTPSSSSSRVRTPQP
KTSSHTAVDWGKMAEQWLQEKEAERRKQKTPRMTPRPSPSPMIESTPMSIPGDATPLLDE
MDR
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcattgaaagcgaggctgaggagtctgaggaggagtttgaggagaaggat
ctgaaacccaaaaagactcagagatttatggaagatgatgaagatgaagaggaagaggag
aacactgaggaccaagatgaacatggaaacctgaagggcctgattgatgatggcaatgat
gatgatgatgatgaagaagtggaggatgaagaggaggcagatgaaaacaggagtgaaggt
gaaggtggtggcggtggcggtggtgatggaggtggagacagtgattctggagatgaggtc
cgacatcggcgcagaaagcgcgcttatgacgacgttctggatgatgatgatctggatctt
attgaagaaaacttgggggtcaaagttaagaggaggaaaaagaagtactccagagtgaaa
accatggatgatgaaggtgaagatgatgagaaagatctaattgctgatgagatcttcact
ggagatggtgatggagagttggaggaaggagaagctgtagaaaggcctcacccaggggat
gatgaggaagaggaagaggaggaggaatcagacatagatgatttcattgtggatgatgat
ggacaacccctcacgaaaaagaagggaaagaaatttactggatacactgatgccgcttta
caagaggctcaagagattttcggtggagactttgactttgcggagtttgacactgaggct
tacgatcgtgctgaggaggaagaggaggaccaggatgatgaagcatgggatcgcccgaag
aagcagaccaagaggagagtgggccgccgcagcatcttcgagatctatgagcccagtgag
ctggagagcagccacatgactgaccaggataacgaaattcgcagcacagacatgcctgag
aggttccagttgcgtgccatacctgtgaagcctgctgaggatgatgagctggaagaagag
gcagaatggatctataggaatgcgttctccacaccaaccatttcaatgcaggagagcaca
gattacctagaccgtggaaccaccactaacttcagcagaaggggccccagcaccattgca
aagatcaaagaggccctcaacttcatgaggaaccagcactttgaggttccattcattgcc
ttctacaggaaggaatatgtggagccagagctgaacattaatgatctgtggaaggtctgg
cagtgggatgagaagtggacccagctaaaaactcgcaagcagaacttgactcgtcttttc
cagaaaatgcagtcctatcagtttgaacagatctctgctgaccctgataagccacttgca
gatgctgtccgcccgctggacaccgctgatatggaaagactgaaagacgtccagtctatg
gatgagctcagtgatgtgtacaaccacttcctgctgtactatggacgagatattcccagg
atgcaaaattcagccaaacccaccaaaaagaagctgaaaaagatcaaggaagtctctgag
gaagatggtgaggaagctgaagtagaagaggaagaagaagaggaggaggagcagaagggt
ccagatctgaaacaggcttcacgcagagatatgtacagcatctgccagagtgctggactt
gatgggctggccaagaagtttggtctcactcctgaacagtttggtgagaacttgcgtgac
agttaccagagacacgagaccgagcagtttcctgcagagcccttagagctggctaaggac
tatgtttgcagccagttcagcactccagaagctgttctggaaggcacccgctacatggtt
gccatgcagattgcccgtgaacctcttgtcaggcatgtgctgagacagaccttccaggaa
agggccaagatcaacatcaaacccactaaaaagggcaagaaagacattgatgaagcacac
tatgcctattccttcaagtacctgaagaacaaacctgtgaaagaactgaatggagatcag
ttcttgaagatatgcatggcagaggatgaaggactgctttctatagacatctgtattgac
ctggttggagttaaagggtatggtggtgatcagacatacttcgatgagatcaagcagttc
tattacagagatgagttcagccaccaggtgcaggaatggaacaagcagcgaatgctggct
attgagcgtgccctccagcagtttctgtaccctcagatggccaaagagctcaaaaataag
cttgttgccgaagccaaggacaatattgtcaagtcatgctgcaggaaactgtataactgg
ctgaaggtggctccatatcgtccagaccagcagatagaagaggacgacgacctgatggat
gagtctcagggcaagggcatccgagttctgggagtagcttttgcctctggcagagacacc
cctgtgttctgtgctctcatcaatggtgaaggagaggttgtggacttccttagacttcct
tatttcctgaaaaggaggaatgcatggagggaagaagaacgagaaaagaagcttcaagac
attgagaacctgaaaaagtttcttctcagtaagaaaccacatgtagtggctgttgcaggt
gaaaatcgggacgcccacatgctcatagaggacatcaagcgtacagtcgctgagcttgag
caagattcatctcttcctgcagtgggagttgaactagtggacaatgaattggcaacactg
tacatgaacagcaaaaagtctgagacggatttcagggattaccctcctctgctccggcag
gctgtatcagtggcccgcaaaatccaggaccctctggttgagtttgcccaggtgtgcagc
actgatgaggatatcctctgcctcaaactccaccccctacaggagcatgtggtgaaggag
gagctgctaggagctctctactgcgagttcattaacagagtgaatgaggttggcgtggat
gtgaatcgagccattgctcatccttacacccagagtctggtccagtatgtctgtgggttg
ggtccaagaaaaggctcacatctgctaaagatcctaaaacagaacaacactcggctggaa
aatcggacgcagttggtcaccatgtgccacatgggacccaaagtgttcatcaactgtgca
ggattcatcaagattgacacagcctcgcttggagacagcactgactcttacatagaggtt
ctagatggttctcgtgtgcatcctgaaacttacgagtgggcacgtaaaatggcagtggat
gccttggaatatgacgagtcagctgaggatgctaatcctgctggagctctggaggagatc
ctggagaatccagagagactgaaagatcttgatctagatgcttttgctgaggagctggaa
agacagggttatggtaataaagggatcaccttgtatgacattcgagcggagctcagctgt
cggtacaaagatctccgagccccgtacagaccccccaacacagaggaggtgtttaatctg
cttactaaggagacccctgagactttctatatcggcaagctgatcaccagtgttgtaact
ggcatagctcacagaaggccacagggggagagttatgaccaggctattcgcaatgatgag
actgggctgtggcagtgtcctttctgtcagcaggacaacttccctgagctcagtgaggtc
tggaaccactttgacagcggctcctgtcctggtcaggcaataggtgtgagaactcgtctg
gacaatgctgtcatgggtttcatccccaccaaatttctttcagacaaagtggtaaagcac
cctgaagagagggtcaaggttggcatgactgtacactgtcgcatcatgaagattgacatc
gagaagttcaatgtggatctcacctgtaggtcgtcggacttggctgacaaaaacaacgag
tggaagcttcctaaggacacctactacgacttcgatgctgagactgacgatgtcaaacag
gaggaggaactgaagaaaaaacagcaaagaaccacttatataaagagagtcatcgctcac
ccatcctttcacaatattaacttcaagcaagcagagaagatgatggagacgatggatcag
ggagatgttgtaatcagaccgagcagtaagggggagaaccacctcaccgtcacctggaag
gtagcggatgggatctaccagcatgtggacgttcgggaggaaggcaaggagaacgccttc
agccttgggcacacgttgtggattaacactgaggaatttgaggatcttgatgagatcaca
gctcgttatgtgcagcctatggcagcgtttgctcgtgatttgctcagccacaagtatttt
caggagtgcaatggtggagacagaaagaaaatggaggaacttcttgttaggtgcaagaaa
gagaagccgacatttatcccgtacttcgtgtctgcttgccgagacctgccgggaaagttc
ttgctgggataccagcctagagggaagccaaggatagaatatgtaaccatcaccccagat
ggcttcaggtaccgctctcagatattcccgacagtcaatggcctcttccgttggttcaag
gaccactaccaagagcctgtgccaggcatcacgccaagcagcagtagcagaacacgaact
ccagcatctgttaatgcaactccggccaacattaacatagcagatttaacccgagcagtg
aatgctctacccaggaacatgacatcccagatgtttaatgccattgctgcagtgacaggt
caaggtcagaatcccaacactactccagctcagtgggcctccagccagtatggatatagt
ggtggcagcagtgccggaggaggcggcagcagcagcgcttatcacgtgtttgctacgcca
caacagccaatggccacgcccatgatgacaccaagctactcgtacaccaccccaggccag
cagcaggccatgaccacaccacagtatcccagcagcacgccacagtcgtcccacggacac
caccagcacgcttcttccacaccgtcctcttcgtcatccagggttcggacgccgcagccc
aaaacaagttcccacacagctgtggattggggtaagatggctgaacagtggctgcaggag
aaagaggcagaaagaaggaagcagaagacccctcgaatgacgccccgcccatcacccagc
ccgatgatcgagagcacgcccatgtccattcctggagatgccacgccactgctggatgag
atggaccgatag
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integrated database retrieval system
