Astyanax mexicanus (Mexican tetra): 103047644
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Entry
103047644 CDS
T05042
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04510
Focal adhesion
amex04512
ECM-receptor interaction
amex04810
Regulation of actin cytoskeleton
amex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103047644 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103047644 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103047644 (itgb4)
04810 Regulation of actin cytoskeleton
103047644 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103047644 (itgb4)
04515 Cell adhesion molecules [BR:
amex04515
]
103047644 (itgb4)
04090 CD molecules [BR:
amex04090
]
103047644 (itgb4)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
103047644 (itgb4)
Exosomal proteins of bladder cancer cells
103047644 (itgb4)
Cell adhesion molecules [BR:
amex04515
]
Integrins
Integrin beta subunits
103047644 (itgb4)
CD molecules [BR:
amex04090
]
Proteins
103047644 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Pur_ac_phosph_N
Integrin_B_tail
Calx-beta
PSI_integrin
I-EGF_1
EGF_2
SEA
I-set
Motif
Other DBs
NCBI-GeneID:
103047644
NCBI-ProteinID:
XP_007237009
Ensembl:
ENSAMXG00000014285
UniProt:
A0A8B9RKG8
LinkDB
All DBs
Position
6:complement(50273668..50312055)
Genome browser
AA seq
1924 aa
AA seq
DB search
MGGWLLSVSVVFISLFVFGCDAESRNRCSASRAVNCSVCLQAGPNCAYCPDEVFPYERCD
LLKNLQSHGCLQMVSVQGSMSTLENVQIDTNRNYAQVAPQQMTMTLLPGEERELVMEVFE
PGRGPLDLYILMDFSNSMSDDLDNLKKMGDQLAKLVGTLSDDYTIGFGKFVDKVIEPQTD
MRPSKLAQPWPNSDPPFSFRHVIPLTNNIKTFREILQRERISGNLDAPEGGFDAILQAAV
CQSQIGWRNDTTHLLVFSTESAFHYEADGVNVLAGVLDRNDEKCHLDTGGSYTHATLQDY
PSVPTLVRTLMKHNIIPVFAVTNHSLSYYERLLEYFPIAELGVLTDDSSNILHIIENAFK
SIRSKISIQTEDRPKAINSQVLSATGGGDLRIQPGEIANVTVRLSARTEYNDKHVCSLSP
NDRSGLLRVKPTTFSSALRIQTNVLCATCECEKNPIERAPRCNGNGALVCGVCRCYNKWM
GPFCNCSAQFQSDAECISPNKTEPCSGRGDCVCGTCICHNPSQYDGPFCQYDKSQCQRYG
GFLCNDRGGCLLGKCVCDDEWTGNSCECPLSNMTCRDNKGGLCNGRGVCKCGRCECEHTG
LALGSTCEPNFQAQLGMCESRRSCVQCQAWKTGERKGDKCRDCPFKVVMVDELKERDKVI
ETCEYRDEDDDCTYYYTVDYPPNPTEKEHEVQVLKKKDCPPGGFLWLIPLIMFLMLLLGL
LLLCCWKYCACCKACLARLLALCCPCCAKGRMVGFKEDHYMLRQSLLTSDHLDTPMVRTG
PPKSTDVVRWKVKDNVHRPANHPQNQIQPNPKEMIDFPVSLRLNRQFSDNLSRLDARDTQ
VLRQEVEDNLNDVFRRIPGAQTVQKTRFRTQRNAGKRQNNTIVDTVLPAPRGSYNDIVNL
TDKQVQSGNFSNLRVMPGYYTVATDRDATGAVELQEGVESVDVRVPLFIKDEDDAKKELL
VEAIDVPLGIAKIGKRFVNITVIKENAKSIFTFLQPSYTFSRQDAVANIPISREIIEDGR
TQVTYSSRDLTAKDKKDYVSVDGDMAYGPGETQKLVQVKLLQLAETDSLLDKQLKQFVLD
LSNPRQGAKLGRIPRTTINIADKPDPSAITFKNNKQSFFVGDPVYNIPVIRTQGQENQST
MNWRVRNSSQLNQTGQLKFAPGEVEKNITLNPLSAQGPIKPETFELELFDPSANNAIRDK
TQVDIIDMRGGDISKKTDMSFQQSAPSGRLHCPANIEATPIGPKNIRLNWKPQMGAKGYK
VKYWIYGDPEAEAQVVDVKNTQAELTNLYPYCDYEMRVCAYNSQGDGEYSDIVQCQTLED
VPSEPGRLAFNVIGPTVTQLSWAEPAEPNGVITEYEVVYTPINENNKPTGPSKKVKIDNP
KKRMLLIENLQPSQTYFYKVRASNKVGWGPYRDATINLASQPHRPMSIPIIPDIPIVDAE
AGEEYDSFLMYSNEVLRSPTTGTRPSVSDMSEDQMINGKWDQKFMFPGGSSSLTRNISTS
STNYSVSPRPGGGNQSMETMTTYVSGKGGSAQHRQDMQFSGGLHTEDVILRKRSENRNYY
DSDGIRDSIVMGDLTSGFSDLLSNSSFSQTTTTNYSLSSNFRNHTEDINDALQNLDRVLQ
DSRLPRGVPETPSRLVFSALGPTALKVSWQEPHCDTPVLGYRVLYQLLSGGEMKQMDVAN
PAQNSVVVQDLLPNQSYLFKVKAQSQEGWGPEREGVITIESTVDPKSPLSPVPGSSFTLS
TPSAPGPLVFTALSPETLQLSWDKPRKPNGEILGYVVTCEQLHGGGDLRSFQVSGNAATS
LTVSDLKENVPYKFKVQAQTTQGFGPEREGIITIESQDGGSMGQYSSQSLMRREVFNLPT
QTSTHTSHTMFSEPFVTADGMMMSSRQVTQHMEVGGSVMRQMEMVQRGVTSTVTKRVEKQ
YYEA
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgggaggatggctgttgagtgtatctgttgtatttatatctctgttcgtctttggctgt
gatgctgagagcagaaaccgctgttcggctagcagagcagttaactgctctgtgtgcctg
caggcagggccgaactgtgcctactgtcctgatgaggtgtttccttatgaacgctgtgat
ctgctgaagaacctgcagtctcatggctgcctgcagatggtctctgtacaggggtccatg
tccacactggagaatgtacaaatcgatacaaatcggaattacgctcaggtggctcctcag
cagatgacaatgacgcttttgccgggggaagagagggagcttgtgatggaagtgtttgag
ccgggccgtgggccactcgacctctacatccttatggacttctcaaactccatgtccgac
gatctggataacctgaaaaagatgggagaccagctggccaaactggttggcacgctgtct
gatgactacaccatcggatttggcaaattcgttgataaagtgattgaaccacagacggac
atgcgaccgtccaagctggcgcagccatggcccaacagcgaccctcctttctcctttcgg
cacgtcatccctctcaccaacaacatcaaaacttttagggagattttgcagagagagaga
atatctggtaacctggatgctccagaaggcggctttgatgccatcttgcaagcagccgtg
tgccagtctcagataggatggaggaatgacaccactcacctactggtcttctccactgag
tcagctttccactatgaggcggatggtgtgaatgtcttggcgggagtgttggaccgcaat
gatgagaaatgccacctggacacggggggcagctacacacatgccaccctacaggactac
ccctctgtgcccacgctggtgcgcaccctcatgaagcacaacattatccccgtcttcgcc
gtcaccaaccactctctgtcctattacgagaggctgttggagtacttccccattgctgag
ctgggagtgctgacagacgactcttccaacatcctgcatattatagagaatgcgttcaag
agcatccgctcaaagatcagcatccaaacagaggacagacccaaagccatcaactctcag
gtcctctcggccacaggaggaggagacctgaggatccagccgggcgaaatagcgaacgtc
actgtgcgtctgagtgctaggaccgaatacaacgataagcatgtgtgcagcctgagtccc
aatgatcgatcagggctcctgagggtcaaacccaccacctttagctccgcccttcggatc
cagactaatgtgctttgtgcaacatgcgagtgtgagaagaacccaatagagagggcaccc
cggtgcaatggaaacggggccctggtgtgtggagtgtgccgctgttacaataaatggatg
ggtccgttctgtaattgctcagctcagttccagtctgatgcggagtgtattagtcctaat
aagacagagccgtgcagtgggcggggagactgtgtgtgtggaacctgtatttgtcacaac
cccagccagtatgacggcccattctgccagtacgacaaatcacagtgccagagatacggt
ggcttcctctgtaacgaccgaggcggatgccttttggggaaatgtgtgtgtgatgatgaa
tggacagggaattcctgcgagtgtccgctcagtaacatgacctgccgggacaataaaggg
ggtctgtgtaatggtcggggtgtgtgtaagtgtggacgatgtgagtgtgaacatactgga
ttggctctgggttcaacatgtgaaccgaacttccaggctcagctgggcatgtgtgagagc
aggaggagctgtgttcagtgccaggcttggaagaccggagagcggaaaggagacaagtgc
agggactgtccatttaaagtggtgatggtggacgagctgaaggaaagagataaagtgatc
gagacgtgcgagtaccgtgacgaggacgacgactgtacgtactactacaccgtggactac
ccaccaaaccctactgaaaaagaacacgaggttcaggtgctaaaaaagaaagactgtcct
cctggaggttttctgtggttgattcctctcatcatgttcctgatgctgttgttgggtctt
ctgctgctctgctgctggaaatactgtgcctgctgcaaggcctgtctggctcgactctta
gccctgtgctgtccgtgctgcgccaaaggtcgtatggtcggctttaaggaagatcattac
atgctacgtcagtctttactgacctcagaccacctggacacaccaatggtgcggaccggc
ccacctaagagcacagatgttgttcgctggaaagtgaaggacaatgtccaccggccggcc
aaccacccacagaaccaaatacagcccaatcctaaagaaatgattgacttcccggtctca
ctgcggctcaacaggcagttttcagacaatctcagtcgtctggatgctcgggacacacag
gtgctcaggcaggaggtggaggataatctcaacgacgtgttcagacggatccctggagct
cagaccgtacaaaagaccagattcaggactcagaggaatgcaggaaagagacagaacaac
acaattgtggacacggttctgccagctccccggggcagctataacgacattgtgaacctg
acagataagcaggttcagtctggaaactttagcaacctgcgggtgatgcctggatattac
accgttgctacagacagagacgcaaccggagcagtggagctgcaggaaggtgtggagtct
gttgatgttagggttccactcttcattaaggatgaggatgatgctaaaaaggagctgctg
gtggaggccatcgacgtccctctcggaatcgccaagatcggaaaacgcttcgtcaacatt
actgtcatcaaagaaaacgctaagagcatcttcaccttccttcagccatcatacaccttc
tctcgccaagacgctgtggctaacatcccaatcagccgtgagattattgaagacggtcga
acacaggtcacctacagcagccgtgacctcaccgccaaggacaaaaaggactacgtgtca
gtggacggagacatggcatacgggccgggagagacgcagaaactggttcaagtgaagctg
ctgcagctcgccgagaccgattctctgctggacaaacagctcaaacagtttgtgcttgac
ctgagcaaccccaggcagggggccaaactggggcggatcccccggaccaccatcaacatc
gctgataagccagaccccagtgccataacgtttaagaacaacaaacagagcttctttgtg
ggcgatccagtctacaacatcccggtgatccgcacccagggccaggagaaccagtccacc
atgaactggcgtgtccgcaactcatctcaactgaaccagaccggccagctcaaattcgcc
ccgggagaagttgagaaaaacatcacgctgaacccgctctcggcccagggtcccataaag
cctgagaccttcgaactggagctgtttgatcccagtgccaacaacgccatcagagacaag
acacaggttgacatcatcgatatgagaggaggagatatttcaaaaaagacagatatgtcg
ttccagcagagtgctcccagtggccgcctccactgccccgccaacatcgaggccacgccc
atcggccccaaaaacatccgcctcaactggaagccccagatgggtgccaaaggctacaag
gtcaagtactggatctatggagaccctgaagctgaagctcaggtggtagatgtgaagaac
actcaggccgagctgaccaacctgtacccatactgcgactacgagatgcgcgtgtgtgct
tataactcgcagggagacggagaatacagtgacatagtgcagtgccagactctggaggat
gtgcccagtgaacctggacgcctggccttcaatgtcattggcccgactgtcactcagctg
agctgggcagagccagcagagcccaatggtgtgatcacagagtatgaggttgtctacaca
ccaatcaacgaaaataacaaacccactggaccatccaagaaggtgaagattgacaacccg
aagaaacgcatgctgttgatcgagaacctgcagccatcgcagacgtacttctacaaagtg
cgcgccagcaacaaggtgggctgggggccatatagagacgccaccatcaaccttgcatcc
cagccacacaggcccatgtccattcctataatccctgacattcccatcgtggatgcggag
gcaggtgaggagtacgacagcttcctgatgtacagtaacgaagtcctgcgctcacccacc
accggcaccaggcccagcgtatcggacatgtcagaagatcagatgatcaacggaaagtgg
gatcagaagttcatgttcccaggtggaagcagttccttgacgcgcaacatcagcacctcc
tccactaattacagcgtgtcaccacgcccaggaggtggcaaccaatcaatggagaccatg
acgacatacgtgtcagggaaagggggatcagcgcagcacagacaggatatgcagtttagt
ggtggtctccacacagaggacgtgatccttaggaagcgctcagagaaccggaactactac
gacagcgacggcatccgggactccattgtgatgggcgacttgaccagcgggttttctgac
ctcctcagcaactctagcttcagccagaccacaactaccaactacagcctgagctccaac
ttccgcaatcacaccgaagacatcaacgatgctctgcagaacctggacagggttctccag
gattcacggctgccccggggggttcctgagaccccgagcaggctggtgttctctgctctg
ggccccacagcgctaaaggtcagctggcaggagccacactgtgacactccagtattggga
tatcgtgtcctctaccagctcctcagtggaggtgagatgaagcaaatggatgttgcaaac
ccagcacagaactctgtggtggtgcaggatctgctgcccaaccagtcgtacctgtttaag
gtgaaagctcagagtcaggaaggctggggacctgagagagagggtgtaatcaccatcgag
tctactgttgaccccaaaagccccctcagccctgtgccaggctcatcgttcactctgagc
actcctagcgccccaggtccactcgtcttcacagctctgagcccggagacgctgcagctg
agctgggataaaccacgcaaacccaacggagaaatcctgggatacgtggtcacatgtgaa
caactgcacggtggaggagatctgcgttccttccaggtgagcgggaacgcggccacctct
ctgaccgtgtcagacctgaaggagaacgtcccgtacaagttcaaagttcaagcccaaacc
acacagggcttcggacctgagagagaaggcattatcaccatcgagtctcaggatggaggg
tctatgggtcagtacagcagtcagtctctaatgaggagagaagtgttcaacctgccaacc
cagacttccacgcacaccagccataccatgttctctgagcccttcgtcacagcagatggt
atgatgatgtcgagccggcaggtcacgcagcacatggaggtgggtggcagtgtgatgcgg
cagatggagatggtacaacgtggagtaacgtccactgtaactaagagggtggagaaacag
tactacgaagcctga
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integrated database retrieval system
