KEGG   Alligator mississippiensis (American alligator): 102561933
Entry
102561933         CDS       T03087                                 
Symbol
Almi-DB01
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain
  KO
K06752  MHC class II antigen
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04145  Phagosome
amj04514  Cell adhesion molecules
amj04672  Intestinal immune network for IgA production
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102561933 (Almi-DB01)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102561933 (Almi-DB01)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102561933 (Almi-DB01)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102561933 (Almi-DB01)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amj04147]
    102561933 (Almi-DB01)
Exosome [BR:amj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102561933 (Almi-DB01)
  Exosomal proteins of epithelial cells
   102561933 (Almi-DB01)
  Exosomal proteins of breast milk
   102561933 (Almi-DB01)
SSDB
Motif
Pfam: MHC_II_beta C1-set Ig_3 ig Ig_2 C2-set_2 MHC_I I-set
Other DBs
NCBI-GeneID: 102561933
NCBI-ProteinID: XP_014458743
LinkDB
Position
Un
AA seq 241 aa
MAHCMRYPEHFMVQGKQECHYTNGSRRVRYLDREIWNQEQFIHFDSDEGRWVADTELGEP
YARYWNSQKDVLEYRQGSVNTFCRHDYQAITPYSVARTVKPKVKVSPTKSGAKVHLDTLV
CFVTGFYPGGIEVKWLKNRQEQTAGVVSTELMQNGDWTFQILVMLEMTPRSGDVYTCQVE
HSSLMGSLTVAWEAKSDSARRKMLTGIGGFMMGLIFLALGLLVYLRNKKGQPVPQPIGLF
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atggctcattgcatgaggtatccagagcatttcatggtacagggcaagcaagagtgtcac
tacaccaatggctcccgccgggtgaggtatctggaccgggagatctggaaccaggagcag
ttcattcacttcgacagtgatgagggcaggtgggtggccgacacagagctgggcgagcct
tatgccaggtactggaacagccagaaggacgtactggagtacagacagggctcagtgaac
acattctgccgacacgactaccaggcgatcacaccttattcagtggccagaacagtgaag
cccaaggtgaaagtctccccaacaaaatcaggggccaaggtccacctggacacactagtt
tgttttgtgacagggttttaccctggcgggattgaggtcaagtggttgaagaacaggcag
gagcagacggccggagtggtgtccacggagctgatgcagaatggagactggaccttccag
atcctggtgatgctggaaatgaccccccggagtggggacgtctacacctgccaggtggag
cacagcagcctgatgggctccctaactgtggcctgggaggcaaagtcggactcagccagg
agaaagatgctgacggggattgggggcttcatgatggggctgatcttcctggcactggga
ctcctcgtctacctaaggaacaagaaaggccagcctgttccccaaccaatagggctcttc
agttag

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