Ailuropoda melanoleuca (giant panda): 100475429
Help
Entry
100475429 CDS
T01329
Symbol
MMP9
Name
(RefSeq) matrix metalloproteinase-9
KO
K01403
matrix metalloproteinase-9 (gelatinase B) [EC:
3.4.24.35
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml01522
Endocrine resistance
aml04657
IL-17 signaling pathway
aml04668
TNF signaling pathway
aml04670
Leukocyte transendothelial migration
aml04915
Estrogen signaling pathway
aml04926
Relaxin signaling pathway
aml05161
Hepatitis B
aml05200
Pathways in cancer
aml05202
Transcriptional misregulation in cancer
aml05205
Proteoglycans in cancer
aml05206
MicroRNAs in cancer
aml05215
Prostate cancer
aml05219
Bladder cancer
aml05415
Diabetic cardiomyopathy
aml05417
Lipid and atherosclerosis
aml05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100475429 (MMP9)
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
100475429 (MMP9)
04670 Leukocyte transendothelial migration
100475429 (MMP9)
09152 Endocrine system
04915 Estrogen signaling pathway
100475429 (MMP9)
04926 Relaxin signaling pathway
100475429 (MMP9)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100475429 (MMP9)
05202 Transcriptional misregulation in cancer
100475429 (MMP9)
05206 MicroRNAs in cancer
100475429 (MMP9)
05205 Proteoglycans in cancer
100475429 (MMP9)
09162 Cancer: specific types
05219 Bladder cancer
100475429 (MMP9)
05215 Prostate cancer
100475429 (MMP9)
09172 Infectious disease: viral
05161 Hepatitis B
100475429 (MMP9)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100475429 (MMP9)
05418 Fluid shear stress and atherosclerosis
100475429 (MMP9)
05415 Diabetic cardiomyopathy
100475429 (MMP9)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
100475429 (MMP9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100475429 (MMP9)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.35 gelatinase B
100475429 (MMP9)
Peptidases and inhibitors [BR:
aml01002
]
Metallo peptidases
Family M10
100475429 (MMP9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PT
PG_binding_1
Reprolysin_4
Reprolysin_3
DUF4953
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
100475429
NCBI-ProteinID:
XP_002928103
Ensembl:
ENSAMEG00000012773
UniProt:
D2HZ16
LinkDB
All DBs
Position
13:complement(59648634..59656352)
Genome browser
AA seq
704 aa
AA seq
DB search
MSPRQPLVLVLLVLGCCSAAPRPHKPTLVVFPGDLRANLTDKQLAEEYLFRYGYTKVAEM
NEDKQSLSRTLRLLQRRLALPETGELDKTTLDAMRAPRCGVPDLGRFQTFEGDLKWHHRD
ITYWIQNYSDDLPRNVIDDAFARAFALWSAVTPLTFTRVYGPEADIVIQFGVREHGDGYP
FDGKDGLLAHAFPPGQGIQGDAHFDDEELWSLGKGVVVPTYFGNSDGAPCHFPFTFEGRS
YSACTTDGRSDDMAWCSTTADYDTDRRFGFCPSERLYTQDGNGDGKPCVFPFTFEGKSYS
SCTTEGRSDGYRWCATTANYDQDRLYGFCPTRVDSTVTGGNSAGEPCVFPFIFLGKEYST
CTREGRGDGHLWCATTSNFDRDKKWGFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMY
PMYSFTEGPPLHEDDVKGIQSLYGPRPDPEPQPPTVQPTAQPTGCPTGPPTTRPSERPTT
GPTGPPAAGPTGPPTAGPSEPPTVTFNPAEDICKVNFFDAIAEIGNRLHFFKDGKYWRFS
DGKARRVQGPFLITDSWPALPHKLDSAFEDPLTRKIFFFSGRQVWVYAGASVLGPRRLDK
LGLGPEVAQITGALPQGGAKVLLFSWQRFWRFDVKTQTVDPNSLGSVGRVFPGVPLNSHN
IFQYQGKAHFCQDRFYWRVNSRNDVNQVDEVGYVTYDFLRCPED
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagccccaggcagcccctggtcctggtgctcctggtgctgggctgctgctctgcggct
cccagaccacacaagcccacccttgtggtcttcccaggagacctgagagctaatctcact
gacaagcagctggcagaggaatatctgtttcgctatggctacacgaaagtggccgagatg
aacgaggacaagcagtctctgagtcggacactgcggcttctccagaggcgcctggctctg
cctgagactggagagctggacaaaaccaccctggacgccatgcgggccccgcgctgtggc
gtcccggacctgggcagattccagacatttgagggcgacctcaagtggcaccaccgggac
atcacttactggatccaaaactactcggatgacttgccgcgcaacgtgatcgacgacgcc
tttgcccgcgcctttgcgctctggagcgcggtgacgccgctcaccttcactcgcgtgtac
ggccctgaagccgacatcgtcattcagtttggtgttagggagcacggagatggatatccc
ttcgatgggaaggacgggctcctggcacacgcctttcctccgggccagggcattcaggga
gacgctcacttcgacgatgaagagttgtggtctctgggcaagggcgtcgtggttccgacc
tacttcggaaactcagatggcgccccctgtcacttccccttcaccttcgagggccgctcc
tactccgcctgcaccacggacggccgctccgacgacatggcctggtgcagcaccacggcc
gactatgacaccgaccgccggttcggcttctgccccagcgagagactctacacccaggac
ggcaatggggacggcaagccctgcgtgtttcccttcaccttcgagggcaaatcttactcc
agctgcaccaccgaaggtcgctcagacggctaccgctggtgcgccaccacagccaactat
gaccaggacagactctatggcttctgccccacccgagtcgactccacggtgaccgggggc
aactccgcgggggagccgtgtgtcttccccttcatcttcctgggcaaggagtactcgacc
tgcaccagggagggccgcggagatgggcacctctggtgtgccaccacctcgaactttgac
agagacaagaagtggggcttctgcccggaccaaggatacagcctgttccttgtggctgcc
catgagtttggccacgcgctgggtttagatcactcatcggtgcccgaagcgctcatgtac
cccatgtacagcttcactgaggggccccccctgcatgaggacgatgtgaagggcatccag
tcgctgtatggtcctcgccctgaccctgaaccacagcctccaacagttcagcccaccgct
caaccaaccggctgccctaccgggcctcccactacccgcccctcagagcgccccactact
ggccccacaggcccccctgcagctggccccacgggtccccccactgctggcccttctgag
ccccctacagtgactttcaacccagcagaggatatatgcaaagtgaacttcttcgatgcc
atcgcggagatcgggaaccgtctgcatttcttcaaggatgggaagtactggcgattctct
gacggcaaggcgcgccgggtgcagggccccttccttatcactgactcgtggcctgcactg
ccccacaagctggactccgcctttgaggacccgctcaccaggaagattttcttcttctct
gggcgccaggtgtgggtgtacgcaggcgcgtcggtgctgggcccaaggcgtctggacaag
cttggcctgggcccggaggtggcccaaatcacaggggccctcccgcaaggcggggctaag
gtgctactgtttagctggcaacgcttctggaggttcgacgtgaagacgcagaccgtcgat
cccaacagcctcggctcggtggggcgggtgttccccggggtgcccctgaactcgcacaac
atcttccagtaccaagggaaagcccacttctgccaggaccgtttctactggcgtgtgaat
tctcggaatgatgtgaaccaggtggacgaagtgggttacgtgacctatgacttcctacgg
tgcccggaggattag
Ailuropoda melanoleuca (giant panda): 100477912
Help
Entry
100477912 CDS
T01329
Name
(RefSeq) stromelysin-1
KO
K01394
matrix metalloproteinase-3 (stromelysin 1, progelatinase) [EC:
3.4.24.17
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04657
IL-17 signaling pathway
aml04668
TNF signaling pathway
aml05171
Coronavirus disease - COVID-19
aml05202
Transcriptional misregulation in cancer
aml05215
Prostate cancer
aml05323
Rheumatoid arthritis
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100477912
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
100477912
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100477912
09162 Cancer: specific types
05215 Prostate cancer
100477912
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
100477912
09163 Immune disease
05323 Rheumatoid arthritis
100477912
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100477912
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100477912
Enzymes [BR:
aml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.17 stromelysin 1
100477912
Peptidases and inhibitors [BR:
aml01002
]
Metallo peptidases
Family M10
100477912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Peptidase_M10
PG_binding_1
Motif
Other DBs
NCBI-GeneID:
100477912
NCBI-ProteinID:
XP_034521501
Ensembl:
ENSAMEG00000010164
LinkDB
All DBs
Position
8:complement(953808..959170)
Genome browser
AA seq
384 aa
AA seq
DB search
MEHLAILVLLCLPVCSAYPLNGAARKEGSTTDFVQQYLENYYNLAKDTKPFVRRRDGGPV
VEKLREMQKFLGLEVTGKLDSDTLEMMHKPRCGVPDVGDFTTFPGMPRWRKTHLTYRIMN
YMLDLPRDAVDSAIEKALSLWEEVTPLTFSKADDGEADIKILFAVRDHGDFIPFDGPGKV
LAHAYPPGPGIYGDAHFDDDEPWTRDTSEGPAPEPPGRRHFWRKSLRTLEPGFYLISSFW
PSLPSGLDAAYEETSKDIVFVFKGNQFWAIRGTEAQAGYPKSIHTLGFPSTFRKIDAAVF
DKEKKKTYFFVGDKYWQFDENSQSVEQGFPRLIVDDLPGVEPEVDAVFQEFGFFYFFRGS
LQFEFDPDARMVTRILKSNNWFYC
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcttgccatcctcgtgctgttatgtctgccagtctgctccgcgtatccactg
aatggagcagcgaggaaggagggctcaaccacggattttgtccagcaatacctggaaaat
tactacaaccttgcaaaagataccaaaccatttgttagaagaagggacggtggtcctgtt
gttgaaaaactccgagaaatgcagaagttcctcgggctggaggtgacggggaagctggac
tcggacactctggagatgatgcacaagcccaggtgtggggtccccgatgtcggcgacttc
accaccttccctggcatgccgaggtggaggaaaacacaccttacttacaggattatgaat
tatatgctggatttgccaagagacgctgttgattctgccattgagaaagctctgagcctc
tgggaggaggtgactccactgactttctccaaggctgacgacggagaggctgacataaag
atcttatttgcagttagagatcatggagactttatcccctttgatggacctggaaaagtt
ctggctcatgcctacccgcccgggcccggcatttacggagatgcgcactttgacgatgac
gagccatggacgagggatacttccgaaggtcctgccccggaaccccctggtaggaggcat
ttttggcgcaaatccctcaggacgcttgaacctggattttacctgatctcctcgttttgg
ccctcccttccttcaggcctggatgctgcatatgaagaaactagcaaggacattgttttc
gtttttaaaggaaatcagttctgggccatcagaggaactgaggcacaagctggttatcca
aaaagcatccacacactcggttttccctcaacctttaggaaaattgatgcagccgttttt
gataaggaaaagaagaaaacgtacttctttgtaggggacaaatactggcagtttgatgaa
aatagccagtccgtggagcaaggcttccccagactaatcgtggatgatcttccaggggtt
gagccggaagtcgatgctgtatttcaggaatttggatttttctatttcttcagaggatcg
ttacagtttgagtttgatcctgatgccaggatggtgacacgtatactgaagagtaacaac
tggttttattgttag
Ailuropoda melanoleuca (giant panda): 100478420
Help
Entry
100478420 CDS
T01329
Name
(RefSeq) LOW QUALITY PROTEIN: stromelysin-1
KO
K01394
matrix metalloproteinase-3 (stromelysin 1, progelatinase) [EC:
3.4.24.17
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04657
IL-17 signaling pathway
aml04668
TNF signaling pathway
aml05171
Coronavirus disease - COVID-19
aml05202
Transcriptional misregulation in cancer
aml05215
Prostate cancer
aml05323
Rheumatoid arthritis
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
100478420
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
100478420
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100478420
09162 Cancer: specific types
05215 Prostate cancer
100478420
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
100478420
09163 Immune disease
05323 Rheumatoid arthritis
100478420
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100478420
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aml01002
]
100478420
Enzymes [BR:
aml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.17 stromelysin 1
100478420
Peptidases and inhibitors [BR:
aml01002
]
Metallo peptidases
Family M10
100478420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Astacin
Reprolysin_3
Reprolysin_5
Reprolysin_4
DUF4953
Motif
Other DBs
NCBI-GeneID:
100478420
NCBI-ProteinID:
XP_002922061
Ensembl:
ENSAMEG00000010203
LinkDB
All DBs
Position
8:complement(996240..1004292)
Genome browser
AA seq
476 aa
AA seq
DB search
MQNLPALLSLCVAVCSAYPVDRASEDEDSMELVQQYLENYYNLAKDTKPFVRRRDGGPVV
EKLREMQKFLGLEVTGKLDSDTLEMMHKPRCGVPDVGDFTTFPGMPKWRKTHLTYRIMNY
MLDLPRDAVDSAIEKALSLWEEVTPLTFSKADDGEADIKILFAVRDHGDFIPFDGPGKVL
AHAYPPGPGIYGDAHFDDDEPWTRDTSGTNLFLVAAHELGHSLGLFHSADPRALMYPVYN
ARTDLARLRLSQDDVAGIQSLYGSPSVSPDDPAVPPESVPPGPETPAACDPSLSFDAIST
LRGEILFFKDRHFWRKSLRTLEPGFYLISSFWPSLPSGLDAAYEETSKDIVFVFKGNQFW
AIRGTEAQAGYPKSIHTXGFPSTVRKIDAAIFDKEKKKTYFFVGDKYWRFDERRRSMEPG
FPRQIAEDFPGVDPKVDAAFEAFGFYYFFNGSSQLEFDPNAREVTHSLKSNSWLNC
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccttccagctctgctgtctctctgtgtggctgtgtgctcggcctacccagtg
gacagagcctcggaggatgaggacagcatggaacttgtgcagcaatacctggaaaattac
tacaaccttgcaaaagataccaaaccatttgttagaagaagggacggtggtcctgttgtt
gaaaaactccgagaaatgcagaagttcctcgggctggaggtgacggggaagctggactcg
gacactctggagatgatgcacaagcccaggtgtggggtccccgatgtcggcgacttcacc
accttccctggcatgccgaagtggaggaaaacacaccttacttacaggattatgaattat
atgctggatttgccaagagacgctgttgattctgccattgagaaagctctgagcctctgg
gaggaggtgactccactgactttctccaaggctgacgacggagaggctgacataaagatc
ttatttgcagttagagatcatggagactttatcccctttgatggacctggaaaagttctg
gctcatgcctacccgcccgggcccggcatttacggagatgcgcactttgacgatgacgag
ccatggacgagggatacttccggaaccaatttattcctggttgccgctcatgaacttggc
cattccctgggtctcttccactcggccgaccctcgcgccctgatgtacccggtctacaac
gcgcgcacagacctggcccgcctccgcctttctcaagatgacgtggctggcatccagtcc
ctgtacggatctccctctgtctccccggatgaccccgcggtgcccccggaatctgtgcct
ccaggacccgagaccccagccgcgtgcgaccccagtttgtccttcgacgcaatcagcact
ctgaggggagaaatcctgttcttcaaagacaggcatttttggcgcaaatccctcaggacg
cttgaacctggattttacctgatctcctcgttttggccctcccttccttcaggcctggat
gctgcatatgaagaaactagcaaggacattgttttcgtttttaaaggaaatcagttctgg
gccatcagaggaactgaggcacaagctggttatccaaaaagcatccacactnccggtttt
ccctcaaccgtaaggaaaattgatgcagccatttttgataaggaaaagaagaaaacgtac
ttctttgtaggagacaaatactggcgatttgatgagaggagacgatccatggagccaggc
ttccccaggcaaatagcagaagacttcccaggggttgaccccaaggtcgatgctgctttt
gaagcatttgggttttactatttcttcaatggatcttcacagctggagtttgacccaaat
gctagggaagtgacacattccttgaagagcaacagctggttgaattgctga
DBGET
integrated database retrieval system