Amycolatopsis sp. YIM 10: YIM_31165
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Entry
YIM_31165 CDS
T06270
Symbol
codA
Name
(GenBank) Choline oxidase
KO
K17755
choline oxidase [EC:
1.1.3.17
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00260
Glycine, serine and threonine metabolism
amyy01100
Metabolic pathways
Module
amyy_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
YIM_31165 (codA)
Enzymes [BR:
amyy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.3 With oxygen as acceptor
1.1.3.17 choline oxidase
YIM_31165 (codA)
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GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
FAD_binding_2
NAD_binding_8
Lycopene_cycl
DAO
Pyr_redox_2
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
QFU91399
UniProt:
A0A5P9PSN0
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Position
6556591..6558144
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AA seq
517 aa
AA seq
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MSEEFDYVIVGGGTAGSVLAARLSEDSSVTVCLLEAGPSDVDDDAILRLDRWMSLLESAY
DWDYLVEPQESGNSFLRHARAKVLGGCSSHNSCIAFWAPAEDLDEWASLGLPGWSAADIF
PLYKELETNDGPGEHHGRSGPVTLRSVPPNDPVGVALLEACEQAGIPRTEFNSGKTVTHG
ANWFQINAREDGTRSSASVSYLHPIIGKRPNLEVKTGLRAKKLVFDGKRCVGVEYQAPDL
LHSKEIRARREVIVSAGAIDSPKLLMLSGIGPAEHLREVGVEVLVDSPGVGENLQDHPEG
LVQWDAKQPMVTESTQWWEIGIFTTTEPGLDRPDLMFHYGSVPFDLNTLRHGYPTTENGF
CLTPNVTRSRSTGTVRLRTRDFRDRPKVDPRYFTDPHDMRVMTYGVRLARKIVAQPAMAA
YAGDELAPGAEAQSDDEIADYLRKTHNTVYHPSCTVKMGSADDPLAPLDERLRVRGVDGL
RVCDGSAMPFLVAVNPCITTMAIGERCADMIAEDAKA
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaggagttcgactacgtcatcgtgggcggggggaccgccggttcggtgctggcg
gcgcgcttgtcggaggactcgtcggtcaccgtctgcctgctcgaagccggtccgtccgat
gtggacgacgacgcgatcctgcggctggaccggtggatgagcctgctggagtccgcctac
gactgggactacctggtcgagccgcaggagtcgggcaactccttcctgcgccacgccagg
gccaaggtgctcggcggctgctcttcgcacaactcgtgcatcgccttctgggccccggcc
gaggacctcgacgaatgggcctcgctcggcctgcccggctggtcggcggcggacatcttc
ccgctgtacaaggaactggagaccaacgacgggccgggcgagcaccacggccggtccggt
ccggtgacgctgcgctcggtaccgccgaacgacccggtcggggtggcgctactggaggcc
tgtgagcaggccggtatcccgcgcaccgagttcaactccggcaagaccgtgacacacggc
gcgaactggttccagatcaacgcccgcgaggacggcacgcggtcctcggcgtcggtttcg
tacctgcacccgatcatcgggaagcggccgaacctggaggtcaagaccgggctgcgggcg
aagaagctggtcttcgacggcaagcgttgtgtcggcgtcgagtaccaggcaccggatctg
ttgcacagcaaggaaatccgcgcgcgtcgcgaggtgatcgtgagcgcgggtgcgatcgac
tcgcccaagctgctgatgctctcgggcatcggcccggccgagcacctgcgtgaggtcggc
gtcgaggtgctggtggactcgccgggcgtcggcgagaacctgcaggaccaccccgagggc
ctggtccagtgggacgccaagcagccgatggtgaccgaatccacgcagtggtgggaaatc
ggcatcttcaccaccaccgagccgggcctggaccggccggacctgatgttccactacggt
tcggtgccgttcgacctgaacaccctgcggcacggctacccgaccacggagaacggcttc
tgcctgaccccgaacgtcacccgcagccgatcgaccggcacggttcgcctgcgcaccagg
gacttccgcgaccggccgaaggtcgatccgcggtacttcaccgatccgcacgacatgcgc
gtgatgacctacggcgtgcggctggcacggaagatcgtggcgcagcccgcgatggcggcg
tacgcgggcgacgaactcgcccccggcgccgaagcccagagcgacgacgagatcgccgat
tacctgcgcaagacgcacaacaccgtgtaccacccttcgtgcacggtgaagatgggcagc
gcggacgacccactggctccgctggatgaacgcctgcgggtccgaggcgtcgacggcctc
cgcgtctgcgacggctcggccatgccgttcctggtcgcggtgaacccgtgcatcaccacc
atggccatcggcgaacgctgcgccgacatgatcgccgaagacgcaaaggcctga
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