KEGG   Aminobacter niigataensis: AMD1_0948
Entry
AMD1_0948         CDS       T09606                                 
Name
(GenBank) Type IV secretion system protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
anj  Aminobacter niigataensis
Pathway
anj03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:anj00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AMD1_0948
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:anj02044]
    AMD1_0948
Enzymes [BR:anj01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     AMD1_0948
Secretion system [BR:anj02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   AMD1_0948
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: CAI2932230
LinkDB
Position
AMD1:929976..931967
AA seq 663 aa
MSATKILWGQITVVFLIVLLTTWAATQYVAWSLGFQAQLGSPWFVLLGVPIYYPPAFFWW
WYFYDAYAPEVFTKGGMIAASGGFIAVAVAIGMSVWRAREAKNAATYGSARWAEKGEVKS
AGLLNPDGVVLGRYDRDYLRHDGPEHVLCFAPTRSGKGVGLVVPSLLTWPGSAIVHDIKG
ENWQLTAGFRARHGRVLLFDPTNPKSSAYNPLLEVRRGEWEVRDVQNIADILVDPEGSLE
KRNHWEKTSHALLVGAILHVLYAEDDKTLAGVAAFLSDPKRPIESTLDAMMKTSHMGEAG
PHPVIASAARELLNKSDNERSGVLSTAMSFLGLYRDPVVAEVTRRCDWRINDMVGGKLPT
TLYLVVPPSDINRTKPLIRLILNQVGRRLTEDLQAKAGRHRMLLMLDEFPALGRLDFFES
ALAFMAGYGLKSFLIAQSLNQIEKAYGPNNSILDNCHVRVSFATNDERTAKRVSDALGTA
TEMKAMKNYAGHRLSPWLGHLMVSRSETARQLLTPGEIMQLPPTDEIVMVAGTPPIQAKK
ARYYEDVRFKERILPPPELARPAEGRPDDWSRLPIPARPDTSDSADPAVNSDEEEDPTGS
ERRHQPELSRVKPVEKMAPIDNEFEFGLPDDTEEDAARNQRLTRVMGGVARQVSLDPNDG
MEL
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgtccgcgaccaaaatcctctgggggcagatcaccgtcgtcttcctgatcgtgttgctc
accacctgggcggcaacgcaatatgtggcatggagcctcggcttccaggctcagctcggt
tctccctggttcgtcctcctgggcgtgccgatctactatccgccggccttcttctggtgg
tggtatttctatgacgcctacgcgccggaagttttcaccaagggcgggatgatcgcggcg
tcgggcggcttcatcgctgtcgccgtcgccatcggcatgtcagtctggcgcgcacgcgaa
gcgaagaacgccgcgacctacggctccgcgcgatgggctgaaaagggggaagtgaagtcg
gcgggtttactcaatcccgatggcgtcgtgctcggccgctatgaccgcgactatctgcgc
catgacggacccgagcatgtcttgtgtttcgcgccgacgcggtcgggcaagggcgtcggc
ctggtcgtaccgtcactgctaacctggccgggctcggccatcgtccacgacatcaaagga
gaaaactggcagctcaccgcaggctttcgcgcccgacatggccgcgtactgctgttcgat
ccgaccaacccgaaatcatcagcctataatccgctgctcgaggtgcggcgcggcgagtgg
gaagtccgcgacgttcagaacatcgccgacatcctcgtcgatcctgaagggtcgctcgaa
aagcgaaaccactgggaaaagaccagtcacgcactgctggtcggcgcgattctgcacgtc
ctctatgccgaggacgacaagacgctcgccggtgtcgccgccttcctctccgatccgaag
cgcccgatcgagtcgaccctcgacgcgatgatgaagaccagccacatgggcgaagctgga
ccgcaccccgtcattgccagcgccgcgcgtgagctactaaacaaatccgacaacgaacgg
tccggcgtgcttagcaccgccatgtcgtttctcggcctctaccgcgatcctgtcgttgcc
gaggtgacacggcgctgcgactggcggatcaacgacatggtgggcggcaagcttccgacc
accctctacctcgtcgtgccgccctccgacatcaaccgcaccaagccgctcatccgcctg
atccttaatcaggtcggtcgccgcctcaccgaggacctgcaagccaaagccgggcgtcat
cggatgctgctcatgctcgacgaatttcccgcgctcggccgtctcgatttcttcgagagc
gcgctggcgttcatggcaggctacggcctcaaaagcttcctgatcgcgcagtcgctgaac
cagatcgagaaggcctatggccccaacaactcgatcctcgacaactgccatgtccgcgtt
tcgttcgccaccaacgacgaacgtaccgccaagcgtgtctccgatgccctcggcaccgcg
accgagatgaaggcgatgaagaactatgccggccatcggctttcgccctggctcggccac
ctgatggtgtcgcgctcggagaccgcgcgccagctcctgacacccggcgaaatcatgcaa
ctgccgccgaccgacgagatcgtcatggtagccggaactccgccgatccaagcgaagaag
gcgcgctactacgaggatgtccgcttcaaggaacgcatcctgccaccacctgaactggcg
cggcccgccgaaggtcggccggacgactggagcaggctgccgatcccggctcgcccggac
acgagcgacagcgccgacccagcggtcaactccgacgaggaagaagatccgaccgggtcc
gagcgtcgccatcagcctgaactcagccgggtgaagcccgtcgaaaagatggcgccaatc
gacaacgaattcgagttcggtctgcccgatgacactgaggaagacgctgcacgcaatcag
cgcctgactcgcgtgatgggcggcgttgcccgccaggtctcgctcgatcccaatgacggc
atggagctgtag

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