KEGG   ORTHOLOGY: K03205
Entry
K03205                      KO                                     
Symbol
virD4, lvhD4
Name
type IV secretion system protein VirD4 [EC:7.4.2.8]
Pathway
map03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ko00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    K03205  virD4, lvhD4; type IV secretion system protein VirD4
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system
    K03205  virD4, lvhD4; type IV secretion system protein VirD4
Enzymes [BR:ko01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     K03205  virD4, lvhD4; type IV secretion system protein VirD4
Secretion system [BR:ko02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   K03205  virD4, lvhD4; type IV secretion system protein VirD4
Other DBs
COG: COG3451
GO: 0008564
TC: 3.A.7
Genes
ECF: ECH74115_A0017
ELX: CDCO157_B0014(traK)
ECOH: ECRM13516_5607(virD4)
EUM: ECUMN_p20022
SHB: SU5_p009
SENH: CFSAN002069_23820
SEEH: SEEH1578_23896
SEA: SeAg_A0023
SED: SeD_B0092
SALZ: EOS98_24465
KPJ: N559_5199
KPNU: LI86_28135
REE: electrica_05640(traG)
CRO: ROD_p2391(taxB)
HDE: HDEF_1342(taxB)
YFR: AW19_4192
ETA: ETA_pET350140(traK) ETA_pET490160(traK)
PMR: PMIP17(taxB)
ANS: ArsFIN_50120(traG_1) ArsFIN_50980(traG_2) ArsFIN_55030(traG_3)
ETR: ETAE_p001
XFA: XF_a0016
XCC: XCC2483(virD4)
XCB: XC_1630
XCA: xcc-b100_1676(virD4)
XCP: XCR_2817
XCV: XCV2810(virD4)
XAX: XACM_2596(virD4)
XAC: XAC2623(virD4)
XCI: XCAW_02647(traG)
XFU: XFF4834R_chr26540(virD4)
XAL: XALr_3251(virD4)
XPH: XppCFBP6546_00315(XppCFBP6546P_00315)
XHD: LMG31886_16830(virD4)
XAG: HEP73_01737(virD4)
XAS: HEP74_01657(virD4)
XAI: HEP75_01701(virD4)
SML: Smlt3008
SMT: Smal_2451
SMZ: SMD_2641(virD4)
SINC: DAIF1_25970(virD4)
STEO: PEM_10550
LAQ: GLA29479_2712(virD4)
LEZ: GLE_2798(virD4)
LEM: LEN_2233
VFI: VF_B0044
PSYR: N018_25980
PSEM: TO66_31700
PANR: A7J50_6063
LPN: lpg1245(virD4)
LPH: LPV_0177(lvhD)
LPM: LP6_1228(virD4)
LPF: lpl0162(lvhD4)
LPP: lpp0180(lvhD4)
LOK: Loa_00198(lvhD4)
LSS: NCTC12082_01623(virD4_1) NCTC12082_02202(virD4_2)
TMC: LMI_2963(lvh1D)
NWE: SAMEA3174300_1306(traG)
NZO: SAMEA4504057_1694(traG)
NMUS: H7A79_0485
BUT: X994_6607
BVE: AK36_5280
BCEN: DM39_4205
BCED: DM42_4811
BUG: BC1001_PA6114(virD4)
BGO: BM43_51
BUK: MYA_6052
BPH: Bphy_7522
TEA: KUI_1144
VEI: Veis_5019
HPSE: HPF_13950(traG1) HPF_14510(traG2) HPF_23380(traG3)
MPT: Mpe_A1677(virD4)
LCH: Lcho_0862
THI: THI_p0047(virD4)
NET: Neut_2628
RPR: RP293(RP293)
RPO: MA1_01420
RPW: M9W_01425
RPZ: MA3_01440
RPG: MA5_02790
RPS: M9Y_01430
RPV: MA7_01420
RPQ: rpr22_CDS287(virD4)
RPL: H375_3230
RPN: H374_7910
RTY: RT0284(virD4)
RCM: A1E_04160
RCC: RCA_03805
RBE: RBE_1018(virD4)
RBO: A1I_02285
RCO: RC0391(virD4)
RFE: RF_0469(virD4)
RAK: A1C_02075
RRI: A1G_02240
RRJ: RrIowa_0470(virD4)
RRA: RPO_02220
RRC: RPL_02210
RRH: RPM_02200
RRB: RPN_04690
RRN: RPJ_02200
RRP: RPK_04245
RRM: RRM_02150
RRR: RRR_02135
RMS: RMA_0402(virD4)
RMI: RMB_06130
RPK: RPR_04275
RAF: RAF_ORF0365(virD4)
RJA: RJP_0312(virD4)
RSV: Rsl_462(virD4)
RSW: MC3_02245
RPH: RSA_02165
RAU: MC5_06000
RMO: MCI_06155
RPP: MC1_02205
RRE: MCC_02795
RAM: MCE_02765
RMC: RMONA_07970(virD4)
RAS: RAS_08930
OTS: OTBS_0007(virD4)
OTT: OTT_1567(virD4)
WOL: WD_0008
WRI: WRi_000090(virD4)
WEN: wHa_00080(virD4)
WED: wNo_10760
WPI: WP1259
WBM: Wbm0283
WOO: wOo_07230
WCL: WCLE_00090(virD4)
WEB: WBP_0557
AMA: AM1312(virD4)
AMF: AMF_992(virD4)
ACN: ACIS_00094(virD4)
APH: APH_1402(virD4)
APY: YYU_06500
APD: YYY_06555
APHA: WSQ_06540
AOH: AOV_04630(virD4)
APLT: ANPL_00190(virD4)
ERU: Erum0260(virD4)
ERW: ERWE_CDS_00130(virD4)
ERG: ERGA_CDS_00130(virD4)
ECN: Ecaj_0018
ECH: ECH_0040(virD4)
ECHA: ECHHL_1017
ECHP: ECHWP_1011
EHH: EHF_0992
MMN: midi_00443(virD4)
RBT: NOVO_03380(traG)
MLO: mlr9261
MHUA: MCHK_7032
NTU: NTH_04568(traG_3)
SME: SMa0929(traG)
SMX: SM11_pC0239(virD4) SM11_pC1041(traG)
SMI: BN406_04306(virD4) BN406_06821(traG)
SMEL: SM2011_a0929(traG)
SMER: DU99_23115
RHI: NGR_a03950(traG) NGR_b10520(traG)
SFD: USDA257_c29440(virD4)
SIX: BSY16_6231(traG)
EMX: FKV68_22510(traG) FKV68_24560(traG) FKV68_30465(traG)
ENU: PYH37_005833(traG) PYH37_005937(virD4)
EGI: PZN02_006212(traG) PZN02_006322(virD4)
SKM: PZL22_005390(virD4) PZL22_006199(traG)
STEG: QA637_25760(traG) QA637_30740(traG)
EAD: OV14_c0045(traG)
EAW: ACEP9W_19585(traG) ACEP9W_29520(traG)
ATU: Atu5108(traG) Atu6124(traG) Atu6184(virD4)
ATF: Ach5_48820(traG) Ach5_51390(traG) Ach5_52730(virD4)
AGC: BSY240_4676(traG)
AGT: EYD00_23680(traG)
ARUI: G6M88_22730(traG) G6M88_24950(traG) G6M88_25225(virD4)
AVF: RvVAR031_pl05900(traG)
ASAL: CFBP5507_24630(traG) CFBP5507_26930(traG) CFBP5507_27200(virD4)
RIR: BN877_p0177(traG)
ACUC: KZ699_25260(traG) KZ699_25685(virD4) KZ699_26220(traG)
AGRC: GSF67_24710(traG)
AVI: Avi_7061(traG) Avi_8128(traG) Avi_8210(virD4) Avi_9186(traG) Avi_9589(traG) Avi_9810(avhD4)
RET: RHE_PA00070(virD4) RHE_PA00156(traGa) RHE_PD00167
REP: IE4803_PB00266(traG-1) IE4803_PD00259(traG-2)
REI: IE4771_PA00202(traG-1) IE4771_PB00374(traG-2) IE4771_PE00275(traG-3)
RLE: pRL70071 pRL70134 pRL80120(traGp8)
RLG: Rleg_5517
RHN: AMJ98_PC00198(traG-1) AMJ98_PE00648(traG-2)
RHX: AMK02_PC00191(traG)
RHK: Kim5_PA00240(traG-1) Kim5_PD00238(traG-2)
REZ: AMJ99_PB00194(traG-1) AMJ99_PD00647(traG-2)
RHR: CKA34_02265(traG)
RAD: CO657_23145(traG) CO657_32765(traG)
RBAN: J2J98_27115(traG)
RAW: NE851_02630(traG) NE851_07730(traG)
RSUL: N2599_30245(traG) N2599_35200(virD4) N2599_36660(traG)
RLW: RlegWSM1455_27740(traG)
ARA: Arad_12074 Arad_14091(traG) Arad_4814(traG)
RIF: U5G49_006058(traG) U5G49_007188(traG)
RHIZ: QMO80_005899(traG) QMO80_006539(traG)
OIN: IAR37_21100(traG)
OAH: DR92_2296(traG)
OCL: GTN27_20745(traG)
OCC: KMS41_23285(virD4)
OCH: CES85_5351(traG)
BJA: bll1701(trbG)
BBAN: J4G43_052110(traG)
OCA: OCAR_7705
BHE: BH13380(traG)
BHN: PRJBM_01318(traG1_1)
BHS: BM1374165_01395(traG1_1)
BQU: BQ10640(traG)
BQR: RM11_0986
BTR: BT_1701(virD4)
BTX: BM1374166_01615(traG1)
BGR: Bgr_14930(traG1) Bgr_17340(traG2) Bgr_p00230(traG)
BCD: BARCL_0633(virD4)
BVN: BVwin_12290(virD4)
BANC: PU02_0199
BEZ: NCTC12898_01219(traG)
BARN: D1092_06055(traG)
BKY: D1093_08930(traG)
BALS: HWV54_02595(traG)
BTAY: LAJ60_04090(traG)
BMAC: LNM86_09200(traG) LNM86_09945(traG)
BHAR: NMK50_07660(traG)
XAU: Xaut_5000
XDI: EZH22_29085(traG)
APRA: G3A50_22220(traG)
MDI: p1METDI0118(traG)
MCH: Mchl_5572
MAQU: Maq22A_5p70155(virD4)
MIND: mvi_61120(traG_1) mvi_64550(traG_2)
PNF: V6617_18550(traG)
DNP: N8A98_02200(traG)
HDI: HDIA_P0013(traG_2)
MMED: Mame_04918(traG)
AUZ: Sa4125_47290(traG)
JIE: OH818_00150(traG) OH818_28155(virD4)
LABT: FIU93_30720 FIU93_31375(traG3)
ACUT: MRB58_23425(virD4)
PZU: PHZ_c2357(virD4)
SIT: TM1040_3794(virD4)
RUT: FIU92_21180(traG1) FIU92_22235(traG2) FIU92_22585(traG3)
RDE: RD1_A0114
DSH: Dshi_3655(virD1) Dshi_3988(virD1)
PGA: PGA1_c22970(virD4)
OAR: OA238_c29370(virD4)
SINL: DSM14862_04229(virD4_1) DSM14862_04370(virD4_2)
RMM: ROSMUCSMR3_04093(traG)
RID: RIdsm_05335(traG_2) RIdsm_05644(traG_3) RIdsm_05935(traG_4)
ROH: FIU89_21135(traG1)
ROT: FIV09_19485(traG2) FIV09_19965(traG3)
PMAU: CP157_03828(virD4)
MANH: LA6_005830(traG_4) LA6_005970(traG_5) LA6_006089(traG_6) LA6_006234(traG_7)
SWI: Swit_5000
SPHD: HY78_28480
SPHM: G432_20300
SJP: SJA_C1-04570(virD4)
SSY: SLG_p_01120(virD4)
SPMI: K663_22738
SPHR: BSY17_4154
GXY: GLX_30740(traG)
ASZ: ASN_1P52(traG)
ACR: Acry_3531
AMV: ACMV_P1_01610(traG) ACMV_P2_00440(traG)
CJEN: N755_01779(cmgD4)
CLA: Cla_a021
CCY: YSS_10030
CCOI: YSU_09010
CCOF: VC76_09045(traG)
CCOO: ATE51_07026(traG)
CPEL: CPEL_a28
ATP: ATR_0729
ACIB: ACBT_2183
 » show all
Reference
PMID:3021341
  Authors
Yanofsky MF, Porter SG, Young C, Albright LM, Gordon MP, Nester EW
  Title
The virD operon of Agrobacterium tumefaciens encodes a site-specific endonuclease.
  Journal
Cell 47:471-7 (1986)
DOI:10.1016/0092-8674(86)90604-5
  Sequence
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