KEGG   Agrobacterium rubi: G6M88_25225
Entry
G6M88_25225       CDS       T08058                                 
Symbol
virD4
Name
(GenBank) type IV secretion system ATPase VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
arui  Agrobacterium rubi
Pathway
arui03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:arui00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    G6M88_25225 (virD4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:arui02044]
    G6M88_25225 (virD4)
Enzymes [BR:arui01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     G6M88_25225 (virD4)
Secretion system [BR:arui02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   G6M88_25225 (virD4)
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: QTG03808
LinkDB
Position
pTiW2_73:108403..110409
AA seq 668 aa
MNSSKTTPQRLAVSIVCSLAAGFCAASLYVTFRHGFNGEAMMTFSVFAFWYETPLYMGHA
TPVFYCGLAIVVSTSIVVLLSQLIISFRNHEHHGTARWAGFGEMRHAGYLQRYNGIKGPI
FGKTCGPRWFGSYLTNGEQPHSLVVAPTRAGKGVGVVIPTLLTFKGSVIALDVKGELFEL
TSRARKAGGDAVFKFSPLDPERRTHCYNPVLDIAALPPERQFTETRRLAANLITAKGKGA
EGFIDGARDLFVAGILTCIERGTPTIGAVYDLFAQPGEKYKLFADLAEESRNKEAQRIFD
NMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSVYDLRRKRTCVYLCVSPNDL
EVVAPLMRLLFQQVVSILQRSLPGKDERHEVLFLLDEFKHLGKLEAIETAITTIAGYKGR
FMFIIQSLSALTGTYDDAGKQNFLSNTGVQVFMATADDETPTYISKAIGDYTFKARSTSY
SQARMFDHNIQISDQGAPLLRPEQVRLLDDNNEIVLIKGHPPLKLRKVRYYSDRMLRRLF
ECQIGALPEPASLMLSEGVHRDGQDLSQQAAVTEAQGLGAIDSIPNNMEAATPQNSEMDD
EQDSLPTGIDVPQGLIESDEVKEDAGGVVPDFGVSAEMAPAMIAQQQLLEQIIALQQRYG
PASSHSVK
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgaattcgagcaagaccacgccccagcgtttagctgtcagcatcgtatgttcgctggca
gccggtttttgcgcggcaagtctctatgtaacatttcgccatggtttcaatggcgaagcg
atgatgacgtttagcgtcttcgccttttggtacgagaccccgctctatatgggtcatgcg
acccccgtcttctattgcggtttagccattgtcgtctcgacgtctattgttgtgctgtta
agccaacttatcatatcgtttcgcaatcacgagcatcatggcacggctcgttgggcggga
tttggcgaaatgcggcacgccggttacctgcagcgctataatggtatcaaggggccgatc
tttggcaagacgtgtggccctcgttggttcggcagctatctgaccaatggcgaacagcct
cacagtcttgttgtcgcgccaacgcgcgccggcaaaggcgttggcgtcgttattccgacg
ctcctaaccttcaagggttcggtgatagccctcgacgtcaaaggcgagctttttgagctg
acttccagagcacgcaaagcgggcggcgacgccgttttcaagttctcacctctggatcca
gagcgacggactcattgttacaatcccgtcctcgatattgcagctttaccgcccgagcgg
cagtttaccgagacgcgccgcctcgccgcaaacctcatcacggccaaaggcaagggagcg
gaaggctttatcgacggcgcgcgggaccttttcgttgcgggcatccttacctgtattgag
cgcggtacgccaacaattggtgcggtctacgacttatttgctcaacctggagagaagtac
aaactttttgcggacctcgcggaagaaagccgaaataaagaggctcagcgtattttcgac
aatatggcgggtaacgacacgaaaattttgacttcttatacatcagtgctcggcgacggc
ggacttaacctgtgggctgatccattggttaaagcagcgacaagtcgatcagatttttcc
gtctatgatctgcgtcggaagaggacctgcgtctatctttgcgtcagccccaacgacctc
gaggtcgtggcgccattgatgcgcctcctttttcagcaggtcgtgtcaattctgcagcga
tcactgccaggtaaagatgagcggcatgaagttttgtttctccttgacgaatttaaacac
ctggggaagcttgaggcaatcgagaccgcgattacaaccatcgccggttacaaaggccgc
ttcatgtttattattcagagtctctcggccttgacgggcacctacgatgacgcgggcaaa
caaaactttctcagtaacactggcgtgcaagtatttatggccacggccgacgacgaaaca
ccgacctatatctcaaaagctatcggcgactatacgttcaaggcgcgttcgacctcatac
agtcaagcccgaatgttcgatcataacatccagatttccgatcagggggcgccgcttttg
cgccccgaacaagtgcgcttgcttgacgataacaatgaaatcgtccttattaaagggcat
ccgcctctcaaactacgaaaggtgcgatattattccgatcgtatgctgaggcgccttttc
gaatgccaaattggcgccctccctgagcccgcatctttgatgctttcggaaggtgtccat
cgggatgggcaagacctcagtcaacaagccgccgtcacggaggcgcagggcttaggtgcc
atcgattcgatacctaataatatggaagccgctacaccgcaaaacagtgaaatggatgac
gagcaggacagcctcccaactggaattgacgtcccccagggccttattgaaagcgatgag
gtgaaagaagacgccggtggcgtggtgccagatttcggtgtttcagctgaaatggctcca
gctatgattgcacaacagcagctgctggagcagatcattgcgcttcagcaacgatatgga
cccgcgtcctcgcactcggtgaaatga

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