Blautia hansenii: CGC63_11625
Help
Entry
CGC63_11625 CDS
T05095
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bhan
Blautia hansenii
Pathway
bhan03030
DNA replication
bhan03410
Base excision repair
bhan03420
Nucleotide excision repair
bhan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bhan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC63_11625
03410 Base excision repair
CGC63_11625
03420 Nucleotide excision repair
CGC63_11625
03430 Mismatch repair
CGC63_11625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhan03032
]
CGC63_11625
03400 DNA repair and recombination proteins [BR:
bhan03400
]
CGC63_11625
Enzymes [BR:
bhan01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CGC63_11625
DNA replication proteins [BR:
bhan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGC63_11625
DNA repair and recombination proteins [BR:
bhan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CGC63_11625
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC63_11625
MMR (mismatch excision repair)
DNA ligase
CGC63_11625
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CGC63_11625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
PTCB-BRCT
BRCT_2
DNA_ligase_ZBD
HHH
Lar_restr_allev
zf-TFIIB
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ASM70085
UniProt:
C9L6I2
LinkDB
All DBs
Position
complement(2283680..2285632)
Genome browser
AA seq
650 aa
AA seq
DB search
MDKMKRMKELLKLLTEASKAYYQEDREIMSNFEYDKLYDELVQLERETGVTLAGSPTASV
GYEALDELPKEAHESPMLSLDKTKDIEALRAFIGEQKSLLSWKLDGLTIVLTYHEGKLQK
AVTRGNGTVGEVITGNAKVFKNIPLQIAYQGELVLRGEAIITYSDFEKINAQIEDVDAKY
KNPRNLCSGSVRQLNNEITAKRNVNFYAFSLVKAEGVDFQNSREQQFCWLKEQGFDVVEY
RVVTGETLDEAMDYFSNQVSKNDFPSDGLVVLYDDIAYGESLGSTAKFPRNAYAFKWKDE
IRETVLKEIEWSASRTGLINPVAIFEPIELEGTTVSRASVHNISIMKELQLGIGDKIQVY
KANMIIPQIAENLTRSGNLEIPKICPVCKKEARVIKTNEVEALYCMNEECQAKKIKSFTL
FVSRDAMNIDGLSEATLEKFILKGFIRDFGDIFEIEKYKDEILEMEGFGQKSYENLIASL
EKAKHTTLPRVLYSLGIANIGLANAKLICKELQYDIEKMIAANEEEISSIEGIGPVIAKA
YTEYFANEENLKKFRHLLSHLELEEVTREENLSLEGKQFVITGSVVHFANRAQLKEEIEK
RGGKVTGSVTSKTHYLINNDTTSNSSKNKKAKELGIPILSEDDFMKMAGM
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatgaaaagaatgaaggaattgctgaaacttttgacagaggcttcaaaagcc
tattatcaggaagaccgagaaataatgagcaatttcgagtatgataagctgtatgatgag
ctggtacagctggaaagagaaacaggtgttaccttagcgggaagtcctacagcttccgta
ggatatgaggcattggatgagctgccgaaggaagctcatgaaagcccgatgctttccctt
gacaaaacaaaagatatagaagcattaagggcgtttatcggagagcagaaatcattactt
tcatggaaattggacggacttaccattgtattgacatatcatgagggaaaactgcaaaaa
gcggtaacaagaggaaacggaaccgtaggggaagttattacgggaaatgcaaaggttttt
aaaaatattccccttcagattgcatatcagggagaacttgttttgcgaggagaggcaatt
atcacctattctgattttgaaaaaatcaatgcacagatagaagatgtagatgccaagtac
aaaaatcccagaaacttgtgcagcggttctgtaagacagctgaacaatgaaatcacagca
aaaagaaatgtgaatttttatgcgttttctttggtaaaggcagagggcgttgattttcaa
aattcacgggaacagcaattttgctggctgaaggagcagggctttgatgttgtggaatat
cgtgttgttacaggagaaacgctggatgaagccatggattatttctcgaatcaggtatcg
aaaaatgattttccttcagatggacttgtagttttatatgatgatattgcctatggagag
tctttgggaagcaccgcaaaatttccgagaaatgcgtatgcgtttaaatggaaggatgaa
atcagagaaactgttttaaaagaaattgagtggagtgcttccagaacaggattgattaat
ccagtggctatttttgagccgatagagctggagggaactacggtcagtcgtgccagtgtg
cataatatcagtattatgaaggagcttcagttgggaattggggataaaatacaggtgtat
aaggcaaatatgattattcctcaaattgctgaaaatctcacaagaagcggaaatttggaa
attccgaaaatatgtccggtatgtaaaaaagaagccagagtgataaaaacaaatgaggtg
gaagcgctgtactgtatgaacgaagaatgtcaggcgaaaaagattaaatcctttaccttg
tttgtaagcagagatgccatgaatattgacggcttatcagaagctacattggaaaaattt
atcttaaaaggttttattcgtgatttcggcgatatttttgaaattgaaaaatataaagat
gaaattttagagatggagggatttggacaaaaatcctacgaaaacctgattgccagtctg
gagaaggcaaagcacacaactttaccaagagtgctgtacagtctggggattgccaacatc
ggtctggcaaatgcaaagcttatctgtaaggagcttcaatatgatattgagaaaatgatt
gcagccaatgaggaagaaatcagcagcatagaaggaattggtccggtaattgcaaaagct
tatacagaatattttgcaaatgaagaaaatttaaagaagttccgtcatttgttgtctcat
ttagaactagaagaggtaacaagagaagaaaatctgtctttggaagggaagcaatttgtt
attacgggaagtgtggtacattttgcaaaccgagcgcagctaaaggaagaaattgagaaa
agaggcggaaaagtaacaggaagtgtgacctcaaaaacacattatttgattaacaatgat
acaacgtcaaattcttcaaagaacaaaaaagcaaaagagcttggtattccaattttatca
gaagatgattttatgaaaatggcaggtatgtaa
DBGET
integrated database retrieval system