Brachyspira murdochii: Bmur_1480
Help
Entry
Bmur_1480 CDS
T01229
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
brm
Brachyspira murdochii
Pathway
brm03030
DNA replication
brm03410
Base excision repair
brm03420
Nucleotide excision repair
brm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Bmur_1480
03410 Base excision repair
Bmur_1480
03420 Nucleotide excision repair
Bmur_1480
03430 Mismatch repair
Bmur_1480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brm03032
]
Bmur_1480
03400 DNA repair and recombination proteins [BR:
brm03400
]
Bmur_1480
Enzymes [BR:
brm01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Bmur_1480
DNA replication proteins [BR:
brm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Bmur_1480
DNA repair and recombination proteins [BR:
brm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Bmur_1480
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bmur_1480
MMR (mismatch excision repair)
DNA ligase
Bmur_1480
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Bmur_1480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
RNA_ligase
STK_08120-like
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
ADG71567
UniProt:
D5UA44
LinkDB
All DBs
Position
complement(1685564..1687555)
Genome browser
AA seq
663 aa
AA seq
DB search
MNKEEAKQKIKQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP
TNKVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLDFDNRMQRELDASNIKYTVENKFDGL
ALELIYEKGKLTVASTRGDGQVGENVTNNVKMMSNVPKSIKEKNKLIVRGEALITKKDFE
ALNKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTNEYKSM
EFLSDLGFTVEGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKYQEKLGFLS
RAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNPNEI
KSKDIRIGDTVVVIRSGDVIPKITRVVLEKRPEDSKPFEFPKKCPVCGGDTAVTDGDVIV
RCINEECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRDDLFKF
ERMGDKLASYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIENFKKAAIED
LQNIEGIGEISAKSIYDFLHNERTLKLIDDLLAAGVNPVFEKVVTVESPLTGKNVVITGS
IEGFTRTSAKEAAERLGAAVQSAVSKNTDILIVGEKAGSKLKKAQDLGIAIMEADEFIKL
ANS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaagaagctaaacaaaaaataaaacaattaacagaaactattaattaccat
aataaactttattatacagatgataaccctgaaatagaagattatgaatacgataaactt
tttagagaattagaaaatcttgaaagagagtttccagaattaaaaaaagatgacagtcct
acaaataaggttggaggcactatattagaaaagtttgaaaagtttgaacacccaattgca
atgtactctctttctaatgttatgaacgaagaggagtttttggactttgataatagaatg
caaagagagcttgatgctagtaatattaaatacaccgtagaaaataaatttgacggactt
gctttagagcttatttatgaaaaaggaaaactcacagtagcaagcacaagaggagacgga
caagttggagagaatgttaccaataatgttaagatgatgagcaatgttcctaaaagcata
aaagaaaaaaataaactcattgtaagaggcgaagcattaataacaaaaaaagattttgaa
gcattaaataaagaaagagaagagcttgaagagataccttttgccaatgcaagaaatgct
gcctcaggcggattaagacaattagacagtgcagaaagtaaaaaaagaagattaaaattc
tttgcatatcaaatagctaattataaagattttgatttaactaatgaatataaatcaatg
gagtttttatccgatttaggttttacagtggaaggagtacatccaaatattgacgctaaa
aaagtattagaaacttattatgatatacaggaaaaaagaagcaaaatggattatgagatt
gacgggcttgtaataaaagttgatgatgtgaaatatcaggagaaattgggatttttatca
cgtgctccaagatttgcagtagcttttaaattcaaacccgaagagaaagaaacagtttta
aagaatattgaagtgcaggttggacgaactggagcattaacaccagttgccaaattagag
cctgttcaagttggaggcgttactgtttctaatgttacacttcataatcctaatgaaata
aaatcaaaagatataagaatcggagatactgttgtagttatacgttccggcgatgttata
ccgaagattacaagagtagtattagaaaagcgtcctgaagacagcaaaccttttgagttt
cctaaaaaatgtcctgtatgcggtggtgatactgctgtaactgacggcgatgtaatagta
agatgtatcaatgaagagtgtccaagtaagataacaagatatatagagtatttcgtttca
aagcctgctatgaatatggagcgaataggcaaagaatggattgctgtatttacaaaaagc
ggacttgtaaaaactccagcagatctttacaaaataacaagagatgatttatttaagttt
gaaagaatgggagataaattagcaagctacatgctcgaatccattgaaaatagtaaaaac
actaccttaaaaagatttatatatgcattgggtattcgtcaggttggtgaaactactgcg
gacttacttgctaaatattttacttctatagagaatttcaaaaaagctgctattgaagac
ttacaaaatatagaaggtataggcgaaataagtgctaaaagtatttacgacttccttcat
aatgaaagaacattaaagttaatagatgatttacttgcagcaggagttaatccagtattt
gaaaaagtagtaacagtggaatcgcctcttaccggaaagaatgttgtaataacaggctca
atagaaggttttacaagaacttcggcaaaagaggcggctgaaagattgggagctgctgtt
cagtcggcagtatcaaaaaatactgatattttaatagtaggtgagaaagctggaagcaaa
ctaaaaaaagctcaggatttaggtatagcaataatggaagccgatgagtttataaagctt
gctaatagctaa
DBGET
integrated database retrieval system