KEGG   Brachyspira murdochii: Bmur_1480
Entry
Bmur_1480         CDS       T01229                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
brm  Brachyspira murdochii
Pathway
brm03030  DNA replication
brm03410  Base excision repair
brm03420  Nucleotide excision repair
brm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:brm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Bmur_1480
   03410 Base excision repair
    Bmur_1480
   03420 Nucleotide excision repair
    Bmur_1480
   03430 Mismatch repair
    Bmur_1480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brm03032]
    Bmur_1480
   03400 DNA repair and recombination proteins [BR:brm03400]
    Bmur_1480
Enzymes [BR:brm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     Bmur_1480
DNA replication proteins [BR:brm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Bmur_1480
DNA repair and recombination proteins [BR:brm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     Bmur_1480
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Bmur_1480
   MMR (mismatch excision repair)
    DNA ligase
     Bmur_1480
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Bmur_1480
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH RNA_ligase STK_08120-like RUBY_RBDX
Other DBs
NCBI-ProteinID: ADG71567
UniProt: D5UA44
LinkDB
Position
complement(1685564..1687555)
AA seq 663 aa
MNKEEAKQKIKQLTETINYHNKLYYTDDNPEIEDYEYDKLFRELENLEREFPELKKDDSP
TNKVGGTILEKFEKFEHPIAMYSLSNVMNEEEFLDFDNRMQRELDASNIKYTVENKFDGL
ALELIYEKGKLTVASTRGDGQVGENVTNNVKMMSNVPKSIKEKNKLIVRGEALITKKDFE
ALNKEREELEEIPFANARNAASGGLRQLDSAESKKRRLKFFAYQIANYKDFDLTNEYKSM
EFLSDLGFTVEGVHPNIDAKKVLETYYDIQEKRSKMDYEIDGLVIKVDDVKYQEKLGFLS
RAPRFAVAFKFKPEEKETVLKNIEVQVGRTGALTPVAKLEPVQVGGVTVSNVTLHNPNEI
KSKDIRIGDTVVVIRSGDVIPKITRVVLEKRPEDSKPFEFPKKCPVCGGDTAVTDGDVIV
RCINEECPSKITRYIEYFVSKPAMNMERIGKEWIAVFTKSGLVKTPADLYKITRDDLFKF
ERMGDKLASYMLESIENSKNTTLKRFIYALGIRQVGETTADLLAKYFTSIENFKKAAIED
LQNIEGIGEISAKSIYDFLHNERTLKLIDDLLAAGVNPVFEKVVTVESPLTGKNVVITGS
IEGFTRTSAKEAAERLGAAVQSAVSKNTDILIVGEKAGSKLKKAQDLGIAIMEADEFIKL
ANS
NT seq 1992 nt   +upstreamnt  +downstreamnt
atgaataaagaagaagctaaacaaaaaataaaacaattaacagaaactattaattaccat
aataaactttattatacagatgataaccctgaaatagaagattatgaatacgataaactt
tttagagaattagaaaatcttgaaagagagtttccagaattaaaaaaagatgacagtcct
acaaataaggttggaggcactatattagaaaagtttgaaaagtttgaacacccaattgca
atgtactctctttctaatgttatgaacgaagaggagtttttggactttgataatagaatg
caaagagagcttgatgctagtaatattaaatacaccgtagaaaataaatttgacggactt
gctttagagcttatttatgaaaaaggaaaactcacagtagcaagcacaagaggagacgga
caagttggagagaatgttaccaataatgttaagatgatgagcaatgttcctaaaagcata
aaagaaaaaaataaactcattgtaagaggcgaagcattaataacaaaaaaagattttgaa
gcattaaataaagaaagagaagagcttgaagagataccttttgccaatgcaagaaatgct
gcctcaggcggattaagacaattagacagtgcagaaagtaaaaaaagaagattaaaattc
tttgcatatcaaatagctaattataaagattttgatttaactaatgaatataaatcaatg
gagtttttatccgatttaggttttacagtggaaggagtacatccaaatattgacgctaaa
aaagtattagaaacttattatgatatacaggaaaaaagaagcaaaatggattatgagatt
gacgggcttgtaataaaagttgatgatgtgaaatatcaggagaaattgggatttttatca
cgtgctccaagatttgcagtagcttttaaattcaaacccgaagagaaagaaacagtttta
aagaatattgaagtgcaggttggacgaactggagcattaacaccagttgccaaattagag
cctgttcaagttggaggcgttactgtttctaatgttacacttcataatcctaatgaaata
aaatcaaaagatataagaatcggagatactgttgtagttatacgttccggcgatgttata
ccgaagattacaagagtagtattagaaaagcgtcctgaagacagcaaaccttttgagttt
cctaaaaaatgtcctgtatgcggtggtgatactgctgtaactgacggcgatgtaatagta
agatgtatcaatgaagagtgtccaagtaagataacaagatatatagagtatttcgtttca
aagcctgctatgaatatggagcgaataggcaaagaatggattgctgtatttacaaaaagc
ggacttgtaaaaactccagcagatctttacaaaataacaagagatgatttatttaagttt
gaaagaatgggagataaattagcaagctacatgctcgaatccattgaaaatagtaaaaac
actaccttaaaaagatttatatatgcattgggtattcgtcaggttggtgaaactactgcg
gacttacttgctaaatattttacttctatagagaatttcaaaaaagctgctattgaagac
ttacaaaatatagaaggtataggcgaaataagtgctaaaagtatttacgacttccttcat
aatgaaagaacattaaagttaatagatgatttacttgcagcaggagttaatccagtattt
gaaaaagtagtaacagtggaatcgcctcttaccggaaagaatgttgtaataacaggctca
atagaaggttttacaagaacttcggcaaaagaggcggctgaaagattgggagctgctgtt
cagtcggcagtatcaaaaaatactgatattttaatagtaggtgagaaagctggaagcaaa
ctaaaaaaagctcaggatttaggtatagcaataatggaagccgatgagtttataaagctt
gctaatagctaa

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