Brassica rapa (field mustard): 103865858
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Entry
103865858 CDS
T03449
Name
(RefSeq) polyglutamine-binding protein 1 isoform X1
KO
K12865
polyglutamine-binding protein 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103865858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103865858
Spliceosome [BR:
brp03041
]
Complex B
Other components
Prp19 complex
103865858
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WW
WW_USP8
DUF3833
Motif
Other DBs
NCBI-GeneID:
103865858
NCBI-ProteinID:
XP_009141961
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Position
A04:20179649..20182389
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AA seq
438 aa
AA seq
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MGEELQQHHNNSSTYGYGSSSLDIESAASNALLHEQEIETQKIIQGQREAGASVDGESNT
DILRQRADPNALKEHLLKFTAHHRAETASKRGSVSTCGEGNVDVGNGYGIPGGVAYAGHS
EISEKPEPTDYLPEYLKHKLKARGILRDGSGAVTSNAHDASAGSWNRQTSVPFQTNANTL
PLGWVDAKDPATGATYYYNQHTGATQWERPLELPSSAPLPMPPKEEWIETLDETSGHKYY
YNTKTHVSQWEPPASLKKPSATNTNNTANGKRELPPSQMPRCSGCGGWGVGLVQSWGYCA
HCTRVCNLPEQQYLAYVTNARNSGQTDPNQRSSSKPPVKKGVGKKRAHAEDDEVDPMDPS
SYSDAPRGGWVVGLKGMQPRAADTTATGPLFQQRPYPSPGAVLRRNAETASSQKKKPGSH
FTEITKRGDGKDGLGDAD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagagcttcaacaacaccacaacaattcatctacttatggctatggaagctca
tcgctagacattgaatctgctgctagtaacgctcttcttcacgaacaagagattgaaacg
cagaagatcatacaaggtcaaagagaggctggagcttcagtagatggagaaagtaacact
gacattcttcggcaacgtgctgaccccaatgctcttaaggaacatttgctgaagttcact
gcacatcaccgtgcagaaacagcatcaaagcgtgggagtgtgagtacttgcggagaaggt
aatgtggatgttgggaatggttatggtataccgggaggagttgcgtacgcaggccactcc
gagatcagtgagaagcctgaacctactgattatctgcctgaatatctcaaacataaatta
aaagccagggggattcttagagatggttctggtgctgttacatccaacgctcatgatgcg
tcagcgggtagttggaatagacagacaagtgtgccttttcagacaaatgcaaacacattg
ccattgggatgggtagatgcgaaagatcctgctactggcgctacatattactataaccag
cataccggggcaacccagtgggaaaggcctcttgagctaccttcaagcgcgccgctaccg
atgcctcctaaagaagagtggattgaaacacttgatgaaacatctggtcataagtattac
tacaatacaaagacacatgtatcgcaatgggagcctccagcttctttaaagaagccctct
gccacaaacactaacaacactgctaatgggaagagggagcttccgccctctcagatgcca
agatgcagcggatgtggtggctggggagtgggccttgtccagagctggggttactgtgct
cactgtaccagagtttgcaatctcccagagcagcagtacttggcatacgtcacaaatgca
agaaactctggccaaaccgatccaaatcagaggtcaagttcaaagcctccggtgaaaaag
ggagtaggcaaaaaacgtgcgcatgcggaggatgatgaggttgacccaatggacccaagc
tcgtactcagatgctccacgtggtggctgggttgtcggactgaaaggaatgcaacctcga
gctgctgatacaactgccacgggtcctttgtttcaacagagaccgtatccatcacctgga
gctgttctgaggagaaacgcagagacggcatcatcgcagaagaagaaaccaggctctcat
ttcactgaaatcacaaagagaggcgatgggaaagatggtcttggtgatgcagattga
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