KEGG   Brassica rapa (field mustard): 103869271
Entry
103869271         CDS       T03449                                 
Symbol
JMJ30
Name
(RefSeq) lysine-specific demethylase JMJ30 isoform X1
  KO
K24444  [histone H3]-dimethyl/trimethyl-L-lysine36 demethylase [EC:1.14.11.27 1.14.11.-]
Organism
brp  Brassica rapa (field mustard)
Brite
KEGG Orthology (KO) [BR:brp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:brp03036]
    103869271 (JMJ30)
Enzymes [BR:brp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     103869271 (JMJ30)
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103869271 (JMJ30)
SSDB
Motif
Pfam: Cupin_8 JmjC_2 JmjC Cupin_2
Other DBs
NCBI-GeneID: 103869271
NCBI-ProteinID: XP_009145582
UniProt: M4F3U2
LinkDB
Position
A05:complement(19843089..19845560)
AA seq 414 aa
MSGAPTAASSGNHSLHLPTPTLDAESQSLLQSISAQGGYAYARMAALAVAGDQSAAEAAR
DMAWEQLHSGPWHSVLPVWRDAYSMACLHVAKFHFAAGEFGEALGALDMGLIMGGTLLRK
DLHDSVLLVSSEARKKAKSLGDFKGEKLVPEVPVDVNEVLKILPLRSLTSGRVDKRSDLS
MEGFLRDYFQTGTPVVITNCMAHWPARTKWNHLDYLTSVAGNRTVPVEVGKNYLCSDWKQ
ELVTFSKFLERMRTNRSTSVEPTYLAQHPLFDQINELRDDICIPDYCFVGGGDLQSLNAW
FGPAGTVTPLHHDPHHNILAQVVGKKYIRLYPSSLQDELYPYSETMLCNSSQVDLDNIDK
NEFPKVVELEFMDCILEEGEMLYIPPKWWHYVRSLTMSFSVSFWWSNEAESSDS
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgtcaggagctcccaccgccgcttcctccggcaaccacagcctccatctcccgactcca
accctcgacgcggagtcgcagtccctgctgcagtcgatctccgctcaaggcggttacgcc
tatgctcgcatggcggcgctagcagtcgccggcgaccaaagcgcggcggaggcggcgcgt
gatatggcctgggagcagcttcactccggtccctggcactctgttctccccgtgtggcgc
gacgcttactcgatggcgtgtctccacgtggccaagttccatttcgccgccggcgagttt
ggggaagccctcggcgcgctcgatatgggtctcatcatgggagggacgcttctccgcaag
gacctccacgactctgtgctcttggtctcctctgaagctcgtaagaaggctaagagcctc
ggagatttcaagggtgagaaacttgtccctgaagttcccgtcgacgtcaatgaggtgcta
aagattctacctttgaggtcattgactagtggaagagtagacaagaggtctgacttatct
atggaggggtttctgcgtgattattttcagacaggtacacctgttgttataaccaattgt
atggctcattggcctgctaggaccaagtggaaccacttggactatctcacttctgttgct
ggtaaccgtaccgttcccgtcgaggtggggaaaaactatttgtgttcagattggaagcaa
gagcttgtgacgttttccaagttccttgaacggatgaggaccaatagatccacctccgtg
gagcctacttatcttgctcagcatccgttgtttgatcagataaatgaactgagagatgat
atatgtattcctgattactgttttgtcggtggaggggatctccaatctcttaatgcgtgg
tttggtccggctgggacagttactcccttacaccatgatccacatcataatatacttgct
caggttgttggcaagaagtatataaggctttacccatcctcattgcaagacgaactttac
ccttattctgagacaatgctttgcaactctagccaggttgatcttgacaacatcgacaag
aacgagtttccaaaggtggtggagctagagtttatggattgtatcctagaggaaggcgaa
atgctgtacatccctcccaaatggtggcactatgtcaggtctttaacaatgagtttctcg
gttagcttctggtggagcaatgaagcagagtcctctgattcttag

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