KEGG   Chryseobacterium capnotolerans: H5J24_09855
Entry
H5J24_09855       CDS       T08205                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ccao  Chryseobacterium capnotolerans
Brite
KEGG Orthology (KO) [BR:ccao00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccao03400]
    H5J24_09855
Enzymes [BR:ccao01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     H5J24_09855
    5.6.2.6  RNA 3'-5' helicase
     H5J24_09855
DNA repair and recombination proteins [BR:ccao03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    H5J24_09855
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: UHO40256
LinkDB
Position
2136494..2138944
AA seq 816 aa
MAAFEHTNGFTIIQQWMKDKGIAPFKFQMDTWKKFGSGYSGMVVAPTGFGKTFSVFLALI
SDFLNHPENYKKGLKMIWVTPLRSLSKDIAKAMQEAMDEIGIDWVVGVRNGDTDPKIRQQ
QVRKIPEILVVTPESLHLLLAQKNHEIFFKDMKCVVIDEWHELLGSKRGVMVELGISQLR
KYVPKLQIWGITATIGNLDEAMDVLIPYDIKKTKITAKEHKKIDIIPVFPDEVEILPWAG
HLGHKLADKVVPIILESKSTIVFTNTRSQSEMWYQLLLDAYPDFAGQIAIHHSSIDAHLR
IWIEENLSSGKLKAVVSTSSLDLGIDFKPVDTVIQIGSAKGVARFLQRAGRSGHSPFETS
KIYCVPTHSLELIEVSALKEAVKQKVVEPREPQVLCFDVLIQFLMTLAVGNGFYPDETYE
RIKKVYAFQEIMDEEWKSILEFLTIGGSVLKNYEEFHKIVIMEDGLYKVTSRKIAMLHRM
NMGVIVSDAMLKVKFISGGYVGMIEEYFISKLKKEERFILAGRTLEVAMIKDMTVYVRAA
KGKALVPSYLGGRLPLSSNLGHFLREKLSHALSPKASEKELKFLHPLLINQEENSHIPQE
NEFLVEMIKNREGYHLFMYPFEGRLVHEVMAALIAFRISKLAPISFSMAMNDYGFELFSD
KEIPLNEENLQQILTRDNLMNDVIASINSAEMARRKFRDIAVISGMVIQNYVGQQRSNKS
LQSSAGLIFKVLEDHDSHHFLIKQAYTEVFNMQLQEQRLVEAFKRIEKSKVILKHSRSFT
PLSFPIKVDSLRQTLSSEGLDARIKRMLKLSNVADI
NT seq 2451 nt   +upstreamnt  +downstreamnt
atggcagcctttgaacataccaacggatttaccatcattcagcaatggatgaaggataaa
ggcattgctccttttaaatttcagatggatacatggaagaaatttggaagcggatatagt
ggtatggtagtagcgcctacaggattcggaaaaactttttctgtttttttagcattgatc
tcagactttttaaaccatcctgaaaactataaaaaaggattaaaaatgatctgggtcacc
ccactccgttcattgtctaaagatattgccaaggcaatgcaggaagccatggatgaaatt
ggcattgattgggtggttggggtaagaaacggagacacagatcctaaaataagacaacaa
caggtcagaaagatacctgaaatcttggtggtaactcctgaaagtttacatcttttactg
gctcagaaaaatcatgaaatcttcttcaaggatatgaaatgtgttgtgatagatgaatgg
catgaattgttaggttcaaaacgcggtgtcatggtagaactgggaatatcacagcttagg
aaatacgttccaaaacttcagatttggggaattacagccaccattggaaacctggatgaa
gccatggatgttttgataccttatgacattaagaaaacaaaaatcacagcgaaagaacat
aaaaagattgatattattcccgtatttcctgatgaagtggaaatactaccctgggcaggc
catctaggccataagcttgcagataaagtagttcccatcatccttgaatcgaaatctacc
attgtttttaccaatacccgaagtcagagtgaaatgtggtatcaactgcttttagatgcc
tatcctgattttgcagggcaaattgctattcaccacagttctattgatgcccatctgaga
atctggattgaagaaaatctaagttccggaaaattaaaagctgttgtttccacttcatca
ttagacctgggaatagatttcaaacctgttgatacagtgattcaaatcggttctgcaaaa
ggagtggctagatttcttcaaagagcgggccgtagtgggcactctcctttcgaaacatcc
aagatttattgtgttcccacccactctttagaattaatagaggtttctgctttaaaagaa
gccgtaaagcaaaaagtagtggagccaagagagcctcaagtactgtgttttgatgttttg
attcaattcctcatgactctggccgttggaaatggcttttatcctgatgaaacttatgaa
agaattaaaaaagtatatgcttttcaggaaatcatggatgaagaatggaaaagtattctt
gagtttttgaccattggcggcagtgttttaaaaaactatgaggaatttcataaaatcgtc
atcatggaagatggcttgtataaagtaacttcccgaaaaattgctatgcttcaccgaatg
aatatgggcgtgattgtaagcgatgccatgctcaaagtaaaatttatttccggtggttat
gtgggaatgattgaagaatattttatttccaaacttaaaaaagaagaaagatttattctg
gctggtcgaacgttggaagttgctatgattaaggatatgaccgtctatgtaagagctgca
aagggaaaagccctggttccaagttatcttggtggaagattgccattaagttccaatctg
ggtcattttttaagagaaaaactttcgcatgccttaagcccaaaggcttcagaaaaagaa
cttaaatttctgcatccgctattgattaatcaagaagagaattctcacattccgcaggaa
aatgaatttctggtggaaatgatcaaaaaccgcgaaggctatcatttatttatgtatcct
tttgaaggccgtctggtacatgaagtaatggccgcgttaattgcctttcggatatcaaaa
ctggcccctatttccttttcaatggcaatgaacgactatggatttgagctgttcagcgat
aaggagattccgttgaatgaagaaaatttacagcagatattaacccgggataacctgatg
aatgatgtgattgccagcatcaattctgcagaaatggcaaggcggaaattcagggatatt
gcagtgatctccggaatggtgattcaaaattatgtcggtcagcaacgctccaataaatcg
ttgcaaagttcagccgggctcatttttaaagttttggaagatcatgattctcaccacttt
ttaatcaaacaggcctatacagaagtctttaatatgcagcttcaggaacaacggctcgtc
gaagcttttaaaaggattgaaaaatctaaggttattttaaaacattcccggtcttttacg
cctttaagctttcctattaaggtagacagtttgaggcagactctttccagtgaaggattg
gatgcaagaattaaaagaatgctgaaactttccaatgtagcagatatttga

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