KEGG   Cyprinus carpio (common carp): 109101049
Entry
109101049         CDS       T05134                                 
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like
  KO
K06752  MHC class II antigen
Organism
ccar  Cyprinus carpio (common carp)
Pathway
ccar04145  Phagosome
ccar04514  Cell adhesion molecules
ccar04672  Intestinal immune network for IgA production
ccar05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ccar00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    109101049
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109101049
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    109101049
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    109101049
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccar04147]
    109101049
Exosome [BR:ccar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109101049
  Exosomal proteins of epithelial cells
   109101049
  Exosomal proteins of breast milk
   109101049
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 Ig_2 DUF1963
Other DBs
NCBI-GeneID: 109101049
NCBI-ProteinID: XP_018970007
LinkDB
Position
26:14018597..14020439
AA seq 208 aa
MEFIEGFYFNKYPVIKFNSTVGMFEGFSDLGIKTAELWNNDTAFLQKTRASVDTYCKPNA
KPYEAAIYRKKERPTVKLSSVMPGDSTHPALVKCSAYNFYPQPIKVYWLKDGVQVNSDVT
STEELPNGDWYYQIHTMLEYTPKSAEKISCVVEHASFTRPMIYDWTPPAPEFEWDIQLLF
IIESAALLLGIIIAAAGYMYFKIKTSEL
NT seq 627 nt   +upstreamnt  +downstreamnt
atggagttcattgaaggcttttacttcaataaatatccagtcattaagttcaacagcact
gtggggatgtttgaggggttttcagatcttggaataaaaactgcagaactgtggaacaac
gatacagcattcttacagaaaaccagggcttcagttgatacatactgcaagcctaatgct
aaaccttatgaggcagctatctatagaaaaaaagagcggccgacagtgaagctcagttca
gtgatgccaggtgacagcacacatccagctctggtgaagtgcagcgcgtataacttctac
cctcaaccaatcaaagtctactggctgaaggatggtgtgcaggtgaattctgacgtgacc
tccactgaggagctgcccaacggagactggtactaccagattcacaccatgctggaatac
actcccaaatctgcagagaagatctcctgcgtggtggagcacgccagcttcaccagaccc
atgatctacgactggaccccaccggcccctgagtttgagtgggatattcaacttttattc
attattgaatctgctgcactgctgctgggaatcatcatagccgctgctggatacatgtac
ttcaagataaagacatcagaactgtag

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