KEGG   Caretta caretta (Loggerhead turtle): 125645168
Entry
125645168         CDS       T09292                                 
Symbol
CXCR4
Name
(RefSeq) C-X-C chemokine receptor type 4
  KO
K04189  C-X-C chemokine receptor type 4
Organism
ccay  Caretta caretta (Loggerhead turtle)
Pathway
ccay03250  Viral life cycle - HIV-1
ccay03260  Virion - Human immunodeficiency virus
ccay04020  Calcium signaling pathway
ccay04060  Cytokine-cytokine receptor interaction
ccay04144  Endocytosis
ccay04672  Intestinal immune network for IgA production
ccay04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:ccay00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125645168 (CXCR4)
   03260 Virion - Human immunodeficiency virus
    125645168 (CXCR4)
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    125645168 (CXCR4)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    125645168 (CXCR4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125645168 (CXCR4)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    125645168 (CXCR4)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    125645168 (CXCR4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ccay04030]
    125645168 (CXCR4)
   04050 Cytokine receptors [BR:ccay04050]
    125645168 (CXCR4)
   04090 CD molecules [BR:ccay04090]
    125645168 (CXCR4)
G protein-coupled receptors [BR:ccay04030]
 Rhodopsin family
  Chemokine
   CXC Chemokine
    125645168 (CXCR4)
Cytokine receptors [BR:ccay04050]
 Chemokine receptors
  CXC Chemokine
   125645168 (CXCR4)
CD molecules [BR:ccay04090]
 Proteins
  125645168 (CXCR4)
SSDB
Motif
Pfam: 7tm_1 CXCR4_N 7TM_GPCR_Srsx 7TM_GPCR_Srv
Other DBs
NCBI-GeneID: 125645168
NCBI-ProteinID: XP_048726303
EnsemblRapid: ENSCECG00000013926
LinkDB
Position
11:57262959..57266593
AA seq 363 aa
MADATDTLDLYSGFTIEFPDNGTDELGSGRDYGDFKEPCFGHENANFNRIFLPVIYSIIF
LTGIIGNGLVIVVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWSVDAAISWYFGNFLC
KTVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYIGVWLPAMLLTV
PDIIFASTSEVDGRYVCDRVYPHDNWLISFRFQHILVGFVLPGLIILICYCIIISKLSHS
KGHQKRKALKTTVILILAFFACWLPYYIGISTDTFILLGVIRHDCSFETIVHKWISITEA
IAFFHCCLNPILYAFLGAKFKTSAQNALTSVSRGSSLKILSKGKRGGHSSVSTESESSSF
HSS
NT seq 1092 nt   +upstreamnt  +downstreamnt
atggcggacgccacggacaccctggacctgtattctgggttcaccattgaatttcctgat
aatggcactgatgagcttggttctggccgtgactacggggacttcaaagagccatgcttt
gggcatgaaaatgctaattttaaccgtatctttttgccagtcatctactccatcatcttc
ctgaccggaatcattggcaacggattggttatcgttgtcatgggctaccagaagaaatta
agaagcatgaccgacaaatacaggttgcacctttcagtggctgacctcctgtttgtcatc
actttgccattctggtctgtggatgcagctataagctggtacttcgggaactttctgtgc
aagacagtccatgtcatttacactgtcaacctatacagcagtgtcctgattttggccttc
ataagtttagatcgttacctggcgatagtccatgctaccaatagccagagaccaagaaag
ctgttagctgaaaaggtagtgtacataggcgtatggctaccagccatgcttttgacagtg
cctgatataatctttgccagtaccagtgaagtagatggaaggtatgtatgtgatcgcgtc
taccctcatgacaactggctgatttcattcagatttcagcatattttggtaggatttgtg
ttgcctggtctaataatcctgatttgctactgtattataatttctaagctgtcacactcc
aagggtcaccagaagcgcaaagcattgaagactacagtcattctcatccttgcctttttt
gcctgctggctgccttactacattggcatcagcacagacaccttcatcctgcttggagtc
atcaggcatgactgcagctttgagacgatagtacacaaatggatctctattacagaagcc
atagcatttttccactgttgcctgaatccgattctttatgccttcttgggtgccaaattc
aaaacatcagcacaaaatgccttgacatcagttagcagaggatcaagccttaagatcctt
tccaaaggtaaacgtgggggacattcttctgtttctacagagtcagagtcttcaagtttt
cattccagctaa

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