Cricetulus griseus (Chinese hamster): 100757179
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Entry
100757179 CDS
T02813
Symbol
Trpc6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04022
cGMP-PKG signaling pathway
cge04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
100757179 (Trpc6)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100757179 (Trpc6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cge04040
]
100757179 (Trpc6)
Ion channels [BR:
cge04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100757179 (Trpc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
ING
Motif
Other DBs
NCBI-GeneID:
100757179
NCBI-ProteinID:
XP_027270955
UniProt:
A0A8C2LN41
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All DBs
Position
4:122799871..122903125
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AA seq
929 aa
AA seq
DB search
MSQSPGFVARRGGSPLTAPGAGTRRNESQDYLLMDELGDDSCPQLPLPPYGYYPSFRGNE
NRLTHRRQTVLREKGRRLANRGPAYMFNDHSTSLSIEEERFLDAAEYGNIPVVRKMLEEC
HSLNVNCVDYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAIL
NHPAFAEGKRLATSPSQSELQQDDFYAYDEDGTRFSHDVTPIILAAHCQEYEIVHTLLRK
GARIERPHDYFCKCTECSQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELS
NELAVLANIEKEFKNDYRKLSMQCKDFVVGLLDLCRNTEEVEAILNGDAETRQPGDLGRP
NLSRLKLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLA
LIYWCAPCSKMGKIMRGPFMKFVAHAASFTIFLGLLVMNAADRFEGTKLLPNETSTDNAR
QLFRMKTSCFSWMEMLIISWVIGMIWAECKEIWTQGPKEYLFELWNMLDFGMLAIFAASF
IARFMAFWHASKAQSIIDANDTLKDLTKVTLGDNVKYYNLARIKWDPSDPQIISEGLYAI
AVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYIG
AKQNEAFTTVEESFKTLFWAIFGLSEVKSVVINYNHKFIENIGYVLYGVYNVTMVIVLLN
MLIAMINSSFQEIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYLLLKFK
KWMSEMVQGHKKGFHEDAEMNKRNEEKKFGILGSREDLSKFPLDKNQLAHKQSSIRSSED
FHLNSFSSPPRQYQKIMKRLIKRYVLQAQIDKESDEVNEGELKEIKQDISSLRYELLEEK
SQNTEDLAELIRKLGERLSLGPKEEESHR
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagccccgggttcgtggcccggaggggcggctctccgttgactgcccctgga
gccggcacgcggcgcaacgagagccaggactatctgctgatggacgagctgggagacgac
agctgcccgcagctcccgctgccgccttatggctactaccccagcttccggggtaatgaa
aacagactgactcaccggcggcagacagttcttcgtgagaagggaagacggttggctaat
cgaggaccagcatacatgtttaatgaccactcgacaagcctgtctattgaggaggaacgc
tttcttgatgcagccgaatatggcaacatcccagtggtgcggaagatgctagaggagtgt
cactccctcaacgtcaactgtgtggattacatgggccagaatgccctgcagttggcagtg
gccaatgaacacctggaaattacagagctcttgctcaaaaaagaaaacttgtctcgagtt
ggagatgctttactcttagctatcagtaaaggttatgtacggatagtggaggcaatcctc
aaccatccagcttttgctgaaggcaagaggttagccacaagccccagccagtctgaactc
cagcaagatgacttttatgcctatgatgaagatgggactcggttctcccatgatgtgaca
ccaatcattctggctgcccattgccaggaatatgaaattgtacacacactcctgagaaag
ggtgcccggattgaacggcctcatgattacttctgcaagtgtacagaatgtagccagaaa
caaaagcatgactcattcagtcactccagatccaggattaatgcctacaaaggcctggca
agtccagcgtacctgtcattatccagtgaagatccagtcatgacagctttagaactcagc
aatgagttggcagtgcttgccaacattgagaaagagttcaagaatgactacaggaagctg
tccatgcagtgcaaagattttgtggttggtctcttggatctctgcagaaacacggaagaa
gtagaggccatcctaaacggggacgcagagactcgccagcctggggacctcggccgtccg
aatctcagccgattaaaacttgccattaaatatgaagtaaagaaatttgtagctcatccg
aactgccagcaacagctcctctccatctggtatgagaacctctctggtttacggcagcag
accatggcagtcaagtttcttgtggtcctcgcggtcgccattggactgcccttcctggct
cttatatactggtgtgctccatgcagcaagatgggcaaaataatgcgtggaccgttcatg
aagtttgtagcacacgcagcctccttcaccattttcctggggctgctcgtcatgaatgca
gctgacagatttgaaggcaccaagctcctccccaatgaaaccagcacagataatgcgaga
cagctgttcaggatgaaaacatcctgcttctcatggatggagatgctcattatatcctgg
gtaataggcatgatatgggctgaatgtaaagaaatttggactcaaggccccaaagagtac
ttatttgagctatggaatatgcttgattttgggatgttggcgatctttgcagcgtcattc
attgcaagatttatggcgttctggcatgcatccaaagctcagagcatcattgatgcaaat
gacactttgaaggatttgacaaaagtcacactgggagacaacgtcaaatactacaatttg
gccaggataaagtgggacccttctgatcctcaaatcatctctgaaggtctttatgccatt
gctgtggttttaagtttctccagaatagcttacattttaccagcaaatgaaagctttgga
cctctgcagatttcacttggaagaacagtaaaagatatcttcaaattcatggtcatattc
atcatggtgtttgtagcctttatgattggaatgttcaacctctattcttactacattggt
gcaaagcagaatgaagcctttacaacagttgaggaaagttttaagacactgttctgggct
atatttgggctttctgaagtgaagtcagtggtcatcaactacaatcacaagttcattgag
aacattggctatgttctgtacggtgtctataatgtcacaatggttattgttttgctaaat
atgttaattgcgatgatcaacagttcattccaggaaattgaggatgatgctgatgtggag
tggaagtttgcaagggccaaattgtggttttcctactttgaggagggaagaacacttcct
gtgcccttcaatcttgtgccaagtccaaagtccttgctctatctcctattgaaatttaag
aaatggatgtctgagatggtccagggacataagaaaggcttccatgaagatgcagagatg
aacaagagaaacgaagaaaagaaatttggaattttgggaagtcgtgaagacctttcaaaa
tttccacttgacaaaaatcagctggcacacaaacagtcaagtataaggagctcagaagac
ttccacttaaatagtttcagtagccctccaagacaatatcagaaaattatgaaaagactc
attaaaagatatgtactgcaggcccaaatcgataaggagagtgatgaagtgaacgaaggg
gaactgaaggaaatcaaacaggacatctcaagtctccgttacgagcttctggaagaaaag
tctcagaatacagaagatctagcagaacttattcgaaaacttggagagagattgtcctta
ggacccaaagaggaggaaagccacagataa
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