Clupea harengus (Atlantic herring): 105901732
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Entry
105901732 CDS
T09045
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105901732 (recql5)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
105901732 (recql5)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
105901732 (recql5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ5
RecQ_Zn_bind
TFIIS_M
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
105901732
NCBI-ProteinID:
XP_042559122
UniProt:
A0A8M1K5W7
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All DBs
Position
23:complement(23407045..23441466)
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AA seq
1048 aa
AA seq
DB search
MIALQRALKTHFGFDKFRSQQQEDVVKAVIRGDQDVLVCMPTGAGKSLCYQLPAVMSEGI
TLVISPLIALIQDQVDHLRDLNIPACSINSKLPAAERRSIMSDLASARPTLKLLYITPEM
VASPVFQPSLGDLSARGLVARLAVDEAHCVSQWGHDFRPDYLRLGDVRERLLPGVPCVAL
TATAPERVRQDITSSLRLREPRHYALPVFRANLRYDVIFSELLPDPNTHLATFAQDAFKE
GGKGCGIVYCRTRDCCEEVAHKLTKLGVQAKPYHAGLKSADRLQAQIDWTEGRLPVIVAT
ISFGMGVDKANVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSHRDKEQMAFLIN
KEVARKQAKRGAEKERDNSALKDFQAMVSYCEQEGCRHATISAFFGDATPVCAGACDFCR
DPKAVRAQLARGAARHSTHTGPANRGPSGPFGYDKDLYAGGRKGYGFERFDEEDGGGGEG
DESDTRKKEFQDVFKKQMNLRKGFGSDAPRNHFIPPDDDCPLMEASSQKIPKLTVKAREY
CLSLLKESLNLQKGEEDSSETLALAVDIEHEVFRSCKKANLYKAYVLKRVGELKKGASGA
SSPRVAGSGSAGGCKVKTEPTEAGEEAAASSSSSSAVTEEQYDLTPASQIYSLQLKRKRI
GAGLRGSSNPFQTANELLKGQCDSAPTGASAKEDEEEEEGERPERKSARAGPKEVTTSIR
AKANAVAANQGSPSKRGGRGLSKKQQKLAEVAKETRSISSFFKKKDTHTHTHTHTKTHSD
SEADTPTKSDGSEHTATHTNARTHAVTHTNAHTHTVTHTATHTVKVKEEPLEEEVKHTVS
THTTCGDGGSRNGLQTVPPDTVVMERVATGVVAMETSPARGDAPRLEESGGRAVTVGYNR
ENKVKEEAEESPETKSPPSKLAQRHPADTRRRVTFNPSVQEQRFETGSDAAAVAAAARVA
TLKEAADAVVKYLDPHYKQGRFASRELFKAFAKHMSHLLTGTRLSTVKVKCEAKRLIKCF
FGKVQRCERESDWAFLKEELHSIKTEER
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgattgcacttcagcgggctctcaaaacccatttcgggttcgataagttccgctcacag
cagcaagaagatgtcgtcaaagcagttatcagaggtgaccaagatgtgttggtgtgcatg
ccgacgggtgcgggcaagtctctgtgctaccagctccccgcggtcatgtcggaggggatc
accctggtcatctcccccctgatcgccctcatccaggatcaggtggaccacctgcgtgac
cttaacatccccgcctgctccatcaactccaagctgccggctgcggagcggcggtcgatc
atgtcggacctggcgtcggcgcgccccacgctgaagctgctgtacatcacgccggagatg
gtggcgtcgcccgtcttccagcccagcctgggcgacctgagcgcccgcggcctggtggca
cggctggccgtcgacgaggcacactgcgtctcacagtgggggcacgacttccggcccgac
tacctgcgcctgggggatgtgcgtgagcgcctgctgcccggagtgccgtgcgtggcactg
actgccaccgcccccgagcgcgtgcgccaggacatcaccagctccctgcgcctccgtgag
ccgcgccactacgccttgcccgtcttccgtgccaacctgcggtacgacgtcatcttcagc
gagctgctgcccgacccaaacacacacctggccacgttcgctcaggacgcattcaaggag
ggagggaagggttgtgggattgtatactgcagaaccagagattgctgtgaagaagtggcc
cacaaactcaccaaactgggagtccaggccaaaccctaccatgcagggctgaagtcagca
gaccgtctccaggcccagatagactggacggaggggaggcttcctgttatcgtggcaacc
atcagctttgggatgggcgtggacaaggcaaacgtcaggttcgtggcccactggaacctg
gcgaagtctctggctagttactaccaggagtctggccgcgccgggagagacggcctcccc
tcctcctgcaggacctactactcccacagggacaaggagcagatggccttcctcattaac
aaggaggtcgcacgcaaacaggcgaagagaggtgctgagaaggagcgggacaattcagct
ctaaaggatttccaagctatggtgtcctactgtgaacaggaggggtgtcgccacgccacc
atctcggcgttcttcggcgacgcgacgccggtgtgtgcgggggcgtgtgacttctgccgg
gacccgaaggcggtgcgggcccagttggcgcggggggcagcacgccacagcacacacacc
ggacccgccaacaggggacccagcggcccgtttgggtacgacaaagacctctacgctgga
gggaggaagggctacggctttgagaggtttgatgaggaggacgggggaggaggtgaagga
gacgagtctgacacacgcaagaaagaatttcaggacgtcttcaagaaacagatgaaccta
cgcaagggttttggttctgatgcccctagaaatcacttcatacccccagatgatgattgt
ccactgatggaggccagcagccagaaaatccccaaactcaccgttaaggcgagagagtac
tgtctgtccctgctcaaggagtccctaaacctccagaagggggaagaagacagctccgaa
acactggccttggctgtggatattgagcatgaagtcttcaggtcctgcaagaaagccaac
ctgtacaaggcctatgtgctgaagagagtgggagagctgaagaaaggggccagtggggcg
tcgtcgccccgtgtggccgggagtggaagtgcaggcggctgcaaagttaaaactgaaccg
accgaggccggtgaggaagcagcagcctcgtcttcctcttcgtccgcggtgacagaagag
cagtacgacctcacgccggcctcacagatctactccctccagctgaagaggaagcgtatt
ggcgcgggcctcagggggtcgtccaaccctttccagacggccaatgagcttctcaaaggc
cagtgtgactccgcccccacaggagcctcagccaaagaggatgaagaagaggaggagggg
gagcggcctgagaggaagagcgcgagggcggggcctaaagaggtcacgacctctatccgt
gccaaggcaaatgcggtggcggccaatcagggcagccccagcaagagaggggggcggggc
ttaagcaagaagcagcagaagcttgctgaggttgccaaggagacacgcagcatctcctcg
ttcttcaagaagaaagacacacacacacacacacacacacacacaaagacacactccgac
tcagaggcagacacacccacaaaatcagacggatccgaacacactgcaacacacactaac
gctcgcacacacgctgtgacacacactaacgctcacacacacactgtaacacacactgcc
acacacacagttaaggtgaaagaggagccactggaggaggaagttaaacacacagtatcc
acacacacgacctgcggtgatgggggcagccggaacggtttacagaccgttcccccagac
acagtcgtcatggagagggttgccacgggggtggttgctatggagacgagtccagcgaga
ggggatgctcccaggttagaagagtctggaggtcgggcagtcaccgtgggatacaacagg
gagaataaagtgaaggaggaggcagaagagtccccggagaccaagtcgcccccctccaaa
ctggcacagcgccaccctgccgacactcgcaggagggtgacctttaaccccagcgtgcag
gagcagcgcttcgagacaggaagtgatgcggcggctgtggcggcggcggcgcgtgtggct
acgctgaaggaggctgcggacgccgtggtgaagtatctggacccgcactacaaacaggga
cgcttcgcctcaagagagctcttcaaggccttcgccaaacacatgtcacacctgctcact
gggacacggctcagcacggttaaagtgaagtgcgaggcgaagcgtctgataaagtgcttc
ttcggaaaggtgcagcgttgtgagcgagaaagcgactgggcgtttctcaaagaagaacta
cactccatcaaaacggaggagagatga
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