| Entry | T09045 |
| Org code | char |
| Name | Clupea harengus (Atlantic herring) |
| Annotation | yes |
| Taxonomy | TAX: 7950 |
| Lineage | Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupeinae; Clupea |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: animals [BR:br08612] |
| Data source | RefSeq Assembly: GCF_900700415.2 (Chromosome)
BioProject: 587748 |
| Chromosome | 1 (RS: NC_045152)
2 (RS: NC_045153)
3 (RS: NC_045154)
4 (RS: NC_045155)
5 (RS: NC_045156)
6 (RS: NC_045157)
7 (RS: NC_045158)
8 (RS: NC_045159)
9 (RS: NC_045160)
10 (RS: NC_045161)
11 (RS: NC_045162)
12 (RS: NC_045163)
13 (RS: NC_045164)
14 (RS: NC_045165)
15 (RS: NC_045166)
16 (RS: NC_045167)
17 (RS: NC_045168)
18 (RS: NC_045169)
19 (RS: NC_045170)
20 (RS: NC_045171)
21 (RS: NC_045172)
22 (RS: NC_045173)
23 (RS: NC_045174)
24 (RS: NC_045175)
25 (RS: NC_045176)
26 (RS: NC_045177)
MT; Circular (RS: NC_009577) |
| Statistics | Number of protein genes: 26665
Number of RNA genes: 748
|
| Created | 2023 |
| Reference | PMID: 31649060 |
| Authors | Pettersson ME, Rochus CM, Han F, Chen J, Hill J, Wallerman O, Fan G, Hong X, Xu Q, Zhang H, et al. |
| Title | A chromosome-level assembly of the Atlantic herring genome-detection of a supergene and other signals of selection. |
| Journal | Genome Res 29:1919-1928 (2019)
DOI: 10.1101/gr.253435.119 |
| Reference | PMID: 17123838 |
| Authors | Lavoue S, Miya M, Saitoh K, Ishiguro NB, Nishida M |
| Title | Phylogenetic relationships among anchovies, sardines, herrings and their relatives (Clupeiformes), inferred from whole mitogenome sequences. |
| Journal | Mol Phylogenet Evol 43:1096-105 (2007)
DOI: 10.1016/j.ympev.2006.09.018 |
Clupea harengus (Atlantic herring)