Clupea harengus (Atlantic herring): 105902339
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Entry
105902339 CDS
T09045
Symbol
rrbp1a
Name
(RefSeq) ribosome-binding protein 1a isoform X1
KO
K14000
ribosome-binding protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105902339 (rrbp1a)
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GFIT
Motif
Pfam:
Rib_recp_KP_reg
Nuc_N
Motif
Other DBs
NCBI-GeneID:
105902339
NCBI-ProteinID:
XP_031434715
Ensembl:
ENSCHAG00000019098
UniProt:
A0A6P8GIL1
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Position
13:complement(2942010..2961117)
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AA seq
1144 aa
AA seq
DB search
MDIYDPQTLGIMVFSGFMLISAIGIALVSTFSMKETSYEEALAKQRQELNKTQTQTQRSE
KKKKDKALDKRNRGKKKDDKPNGKLPDTESATPDLSESEGTPTPAAEPKRDPSPVPEAVV
APVPTPTPAPVPVVAAPAPAPVSAPAPSMSAPPRPAQVEAPAAPSPKDKKKKEKKVAKVE
PAQSQQAAPATPKPVASKPEVVVKEVPVMAVPPVGAQKSAPPAAPAVASLPAKAEEPKAE
AQSKKKGGSKKKAEPAAVATDSVDAPLYLPYKALVSTVKSMMFSEGEAQQLIEILSEKAG
VGTWHTATQKGDPVAVLKKQLEEREKQLAAEQQDATAAKNRLREMTKELSAEKSKVAHTE
TRLSTKLSTREQEMVALQARMQASYQDHVAETHKSKAKIQSLQEQLDKGPSAQMVRLQQE
NSILRDALNQATSQSESKQNAELAKLRQECTKLSKEAGEKSEALQADEQIRKNLEAKVAA
AESQFSQLQASRVSSEQGLQRRLEEVSEELRVSQSSNRSLQAQMEQASQEGTALTDLQAR
VASAEASLQERGVLVDALEARLLQTELEKSQLEDQVGSIHVLLEASQSREEDDDEVQATT
SAELEQMKNSLKEKESQVAALEEQLKQLSEMKPDTITNAVANTTEAEQPPGEEQQSLIAS
LEEKLRSLMEEMESKNVGNAEITGELEQLRVSLKEREALLASLEAELQHVKEEKANVPSQ
ADNTTELEALQNSLSEREKQVASLEEELKQAQSSADPLPDHTAELASLQSSLTERDGLVT
SLQQELQKLKEEEQSKGDDKGEFTAFQTETKEVLHSLFPHIDIQTEETKWLQDFAQKAQE
TLTQRQQSQETPQSTELEEVLGKLRGAEESQTTLQAECEQYRIVLGETEGMLKHLQRSVE
DEEKGWKVKVTELQDQLKTALEKVQSLEETAESENTDQLKEQVMLLEAQLEKQLESATSD
HNYSEEMTQLKLLLDETQRHLDVAQREAQAQREELSLVREQLSEMTERAQREDETAGPQN
GQSEPEVQAKLASTVSKLHGEEGLRLQVSEEFEQAQRTVMELQDQLDLLKASGDAPTSDT
EDVAELKERLEKEKKLSKDLGQAATKLQQLLKVSQELLAKEKDTVNVLRDQLIGKVTDKY
DLRP
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggacatctacgacccccaaacgcttggcattatggtcttcagtggcttcatgctgatc
tcagccattggcattgccctggtctccaccttctccatgaaggagacgtcttacgaggag
gccctggccaagcaaaggcaggagctcaacaagacccagacccagacccagcgctcagag
aagaaaaagaaagacaaggcactggacaaacgaaaccgagggaagaagaaggatgacaag
cccaacgggaagcttcctgacacggagtctgcaacgcctgacctgagtgagtccgagggc
accccgacaccagccgctgaacccaaacgagacccgtcccctgttcctgaggcggtggtg
gctccagtccccaccccaacccctgctcctgtccccgtggttgccgctcctgcccctgct
ccagtttctgcccctgccccgtctatgtcagccccgccacggcctgctcaagtcgaggct
ccagccgccccctctccgaaggacaagaagaagaaggagaagaaggtggccaaagtggag
ccggctcagtcccagcaggctgcccccgcaaccccgaaacccgttgcttccaagcctgag
gttgtggtcaaagaggttcctgtgatggcggtgcccccagtgggcgcccagaaaagcgca
cccccagctgcgcctgctgttgcttctctgcctgctaaagctgaggaacccaaagctgag
gcccaatccaagaagaagggaggctccaagaagaaggctgagccagctgctgtggcaacg
gactcagtggatgcccccctgtacttgccctacaaggccctggtttccacagtgaagagc
atgatgttcagcgagggggaggcccagcagctcattgagatcctgagcgagaaggccgga
gttggaacctggcacacggccactcaaaagggcgaccccgtggcggtgctgaagaagcag
ctggaggaacgtgagaagcagctggcagccgagcagcaagacgccactgcagccaagaac
cgcctccgcgagatgaccaaggagctgtctgctgagaagtctaaggtggcccacacggag
acgcgcctgagcaccaagctgagcactcgcgagcaggagatggtggccctgcaggcgcgc
atgcaggccagctaccaggaccacgtggccgagacccacaagtccaaggctaagatccag
agtcttcaggagcagctggataagggcccaagtgctcagatggttcgcctgcagcaggag
aactccattctgcgcgacgccctcaaccaggcaaccagccagagtgagagcaagcaaaat
gccgagctggccaagctgaggcaggagtgcaccaagctgagcaaggaggcgggggagaag
agcgaagccctgcaggccgacgagcagatcaggaagaacctggaggccaaggtggcagct
gccgagagccagttctctcagctgcaggcgagccgtgtgtccagcgaacaggggcttcag
aggcgcctggaggaggtgagcgaggagctgagggtgtcccagagcagcaaccgcagcctg
caggcccagatggagcaggcctcgcaggagggcacagctctcacagacctccaggcgcgg
gtggcgagcgccgaggcgagcctgcaggagcgcggggtcctggtggatgccctggaggcc
cggctgctccagactgagctggagaagagccagctggaagaccaggtgggctccatccat
gtgctgctggaggccagccagagccgagaagaggatgacgacgaagtgcaggccacaacc
tctgcagagctggagcaaatgaagaacagtctgaaagagaaagagagtcaggtggctgca
cttgaagagcaactgaagcagctctcagaaatgaaacctgacactatcactaatgctgtt
gcaaacactacagaggcagaacagccacccggcgaagagcagcagagtttgatagcatca
cttgaagagaagctaagaagtttgatggaagagatggagagcaaaaatgtcggcaatgct
gagatcacaggcgagctggagcagcttagggtgagtctcaaagaacgggaggcgctgttg
gcatcactggaagccgagcttcaacatgtgaaggaggagaaagccaatgttcccagccag
gctgacaacacaactgaactggaagcactacagaacagcctgagcgagcgagagaagcag
gtggcctctctggaagaggaactgaagcaagcccagagcagcgctgatcccctgcctgac
cacacagcagagttggcatcactgcagagcagcctgacagaaagagatggccttgtcacc
tcactgcaacaggagctgcagaagttgaaagaagaggaacaatcaaagggcgatgacaaa
ggggagttcacagcttttcagacagagaccaaagaggttcttcattcactcttcccacat
atcgacattcagacagaagagaccaaatggttgcaggactttgcacagaaagcacaggag
acactaacccaaaggcaacagagtcaggaaacaccacaaagcacagaactagaggaggtg
ttggggaaattgcgaggtgcggaggagagccagaccacactacaggccgagtgtgagcag
tacaggatcgtcctgggtgaaacggagggcatgctgaaacacctccagaggagcgtggag
gacgaggagaaagggtggaaggtcaaggtcacagagttacaggaccagctgaaaacggct
ctagagaaggtgcagagtctggaggagacggcagaaagcgagaacacagaccagctgaag
gagcaggtgatgctgctggaggcccagctggagaagcagctggagtcggccacgtcagac
cacaactactccgaggagatgacacagctgaagctcctgttagatgaaactcagcgtcat
ctggacgtggcgcagagggaggcacaggcccagagggaggagctgtctctggtcagagag
cagctgagtgagatgacggagcgcgctcagagagaggacgagacagcgggcccgcagaac
ggccaatcagagcctgaggtccaggctaagttggcctccacggtttccaagctgcatgga
gaggagggcctgaggctgcaggtgtctgaggagtttgagcaggcccagaggacggtgatg
gagctgcaggaccagctagacctcctgaaagccagtggagatgcccccacctctgacacg
gaggacgtggccgagctgaaggagcgactggaaaaggagaagaagctgtcgaaggacctg
ggtcaggctgccactaaacttcagcagctcctcaaagtcagtcaggagctactcgccaaa
gagaaggacacagtcaacgtcctcagggaccaacttataggaaaggtaacagacaaatat
gacctaaggccatag
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