Clupea harengus (Atlantic herring): 105905010
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Entry
105905010 CDS
T09045
Name
(RefSeq) claudin-like protein ZF-A89
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105905010
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105905010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105905010
04147 Exosome [BR:
char04147
]
105905010
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105905010
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
105905010
Exosomal proteins of colorectal cancer cells
105905010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
G0-G1_switch_2
Motif
Other DBs
NCBI-GeneID:
105905010
NCBI-ProteinID:
XP_012688435
UniProt:
A0A6P3W302
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Position
9:complement(27435985..27440184)
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AA seq
394 aa
AA seq
DB search
MVSQCRQMLGFSLGIIGFLGSIVICALPMWRVTAFIGANIVTAQVIWEGLWMNCVTQSTG
QMQCKIYDSLLALQQDLQAARALVVIAIIVGVFAILLSISGGKCTNFIEDEASKAKVALA
SGVIFIIAGVLVLVPVCWTANTVIRDFYNPLLTNAQRRASVAMASVGLQILGSVLAFLGW
VGGILTCALPMWRVTAFIGNNIVTSQTMWEGIWLSCVVQSTGQMQCKVYDSMLALTSDLQ
AARALTVVSVVVGVAGLFMAFAGGKCTNFMADEAGKARASVAAGVVLMVSGVLCLVPVSW
TASSIIHDFYNPLLNDAQRRELGGALYVGWGSGLLLLLGGALLCTSCPPKKGKRSASTLR
YHSMKIPKPSSQSDSVPSHKPPTPRSLTPTKTYI
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctcagtgcaggcagatgctgggcttctccctgggcatcatcggcttcctcggc
agcatcgtgatctgcgccctgcccatgtggcgcgtgacggccttcatcggcgccaacatc
gtgacggcgcaggtgatctgggagggcctgtggatgaactgcgtgacgcagagcacgggc
cagatgcagtgcaagatctacgactccctcctggcgctgcagcaggacctgcaggccgcc
cgcgccctggtggtcatcgccatcatcgtgggcgtcttcgccatcctcctgtccatctcc
ggcggcaagtgcaccaacttcatcgaggacgaggcgtccaaggccaaggtggcgctggcc
agcggcgtcatcttcatcatcgccggcgtgctcgtgctcgtgcccgtctgctggacggcc
aacaccgtcatccgggacttctacaaccccctcctgaccaatgcccagcgcagagcaagc
gtcgccatggcatccgtgggcctgcagatcctgggcagcgtcctggccttcctggggtgg
gtggggggcatcctgacctgcgcgctgcccatgtggcgcgtgacggcgttcatcggcaac
aacatcgtcacctcgcagaccatgtgggagggcatctggctgagctgcgtggtgcagagc
acgggccagatgcagtgcaaggtctacgactccatgctggcgttgacctccgacctgcag
gcggcgcgcgccctcaccgtcgtctccgtcgtcgtgggcgtcgcgggcctcttcatggcc
ttcgccgggggcaagtgcaccaacttcatggcggacgaggcgggcaaggcgcgggcgagc
gtcgcggccggcgtggtgctcatggtcagcggcgtcctctgcctcgtgcccgtctcctgg
accgccagcagcatcatccacgacttctacaaccccctcctgaacgacgcccagcgccgg
gagctggggggggcgctgtacgtgggctgggggagcggtctcctcctgctgctggggggg
gcgctcctctgcacctcctgtccccccaagaagggcaaacgcagcgcctccacgctccgg
taccactcgatgaagatccccaaaccatccagccagtctgactctgtgcccagccacaag
ccccccaccccacgctccctaacaccaaccaagacatacatctga
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