Clupea harengus (Atlantic herring): 105905341
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Entry
105905341 CDS
T09045
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105905341 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105905341 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105905341 (vps28)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
105905341 (vps28)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105905341 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
105905341 (vps28)
Exosomal proteins of colorectal cancer cells
105905341 (vps28)
Exosomal proteins of bladder cancer cells
105905341 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
105905341
NCBI-ProteinID:
XP_012688798
Ensembl:
ENSCHAG00000005166
UniProt:
A0A6P3W3D7
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All DBs
Position
19:8398221..8404347
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AA seq
223 aa
AA seq
DB search
MFHGIPASGGMGGAPANKPELYEEVKLYKNAREREKYDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGTIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDK
VSLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcatgggataccagcctcgggaggaatgggaggagccccagccaataaaccagaa
ctgtatgaagaagtgaagctgtacaaaaatgccagagaaagagaaaagtacgataacatg
gcagagctgtttgctgtagtgaagacccttcaagcccttgagaaggcatacatcaaagac
tgtgtcactcctaatgagtacacagcagcatgttccagactgctagtgcagtacaaagct
gctttcaaacaggtccagggttctgatgttggaaccatagatgacttctgcagaaagtat
agacttgactgtccactggccatggagagaatcaaggaggaccgaccaatcaccatcaag
gatgacaagggcaacctgaatcgctgcattgcagatatagtctccctcttcatcacagtg
atggacaaactgcgtcttgagatcagggccatggatgagatccagcctgacctgagggag
ctcatggagaccatgaacaggatgagtaacatgccccctgactcagaggccaaggataaa
gtcagtctctggctgaccactttgagcagcatgtctgcctctgacgaactggacgactca
caagtgcggcagatgctctttgaccttgagtcggcctacaacgccttcaaccgcttcctg
cactcctcctag
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